Variovorax paradoxus S110: Vapar_2952
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Entry
Vapar_2952 CDS
T00916
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vap03036
]
Vapar_2952
Chromosome and associated proteins [BR:
vap03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
Vapar_2952
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
SMC_hinge
AAA_15
ABC_tran
AAA_29
DUF1664
PUMA_CC
Motif
Other DBs
NCBI-ProteinID:
ACS19572
UniProt:
C5CNU5
LinkDB
All DBs
Position
1:complement(3110727..3114242)
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AA seq
1171 aa
AA seq
DB search
MRLNSIKLSGFKSFAEPTNFLLPGQLVGVVGPNGCGKSNIMDAVRWVLGESRASELRGES
MQDVIFNGTTTRKQASRSSVELVFDNADHRAGGQWNQFGEIAVRRVLTRDGTSSYYINNQ
PVRRRDVQDVFLGTGLGPRAYAIIGQGTISRIIESKPEELRLFLEEAAGVSKYKERRRET
ENRLGDTRENLTRVEDILRELNANLEKLEKQAEVAARYNALQGEATKKQHQLWFLKRSES
DADQAKIKADSEKAINDLESRTADLRRIESELETVRQAHYAAGDQVNQAQGKLYEASAEV
GRLEGEIRFVVEGRQRVEQRLVQLREQMGQWGRRREEAEAEIETLAGQGVDAEEQAVLLA
AQLEEHDARMPELEEAVQRAQDEANAQRSTVSQVQQQIQVLAADQRNIEEQSRQLTQRSE
RLRADQNALAAPDEARLQALQEEHAAAQETASEADARLHELQESVPQLDDDRRAKQQAVN
TEGARHAELSARLEALRALQEKVKTDGKLAPWLAKHGLEGMQGLWSRIHIEQGWENALEA
ALRERLGALEVSRLDMVRAFGNDAPPAKLAFYSPPAAGAPQGTAALPRLSSLLRLNDAGL
QALLTDWLHGCYTAQSFEEALAQRATLQPGEVIYVQSGHAVFSHSVNFYAPDSEQAGLLA
RQQEMENLERQLRAQALISEEARTALVRAEAAYADAAQRLVTARREAAETQSRAHELQVE
TLRMTQLAEQTRARSEQLAADLAEVDAQLEELQEKRMAAEGRFEELDMQLADSQERHAQL
DERVIEAGRVLAASREQHRSLERQAQEATFSQRTLEARRGELNRAIETASQQVLSLTDED
ERARAELGRLSDAAAQAGLQDALALKLEREAALGAARSQYDDLTLKLRASDERRLQLERE
LDPLRQRITEFQLKEQAARLGVEQYQQLLDDAGADLEAVAQSIEADKVRLTGLQGEIDRL
NREVVALGAVNLAALDELAVASERKTFLDAQSADLNEAIGTLEDAIRKIDAETRDLLGGT
FKIVNEHFSRMFPELFGGGNARLVMTGDEILDAGVQVLAQPPGKKNQTIHLLSGGEKALT
AIALVFAIFQLNPAPFCLLDEVDAPLDDANTERYAKLVTAMSRETQFLFISHNKIAMEMA
EQLIGVTMQEQGVSRIVAVDMEAAASMVEAA
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtctcaattccatcaagctttcgggcttcaagtcgttcgccgaacccaccaacttc
ctgctgccgggccaactggtcggcgtcgtcgggcccaacggttgcggcaagtcgaacatc
atggatgcggtgcgctgggtgctgggcgagtcgcgcgcgtcggagctgcgcggcgagtcg
atgcaggacgtgatcttcaacggcacgaccacgcgcaagcaggccagccgttcgagcgtg
gaactggtgttcgacaacgccgaccaccgcgcgggcggccagtggaaccagttcggcgaa
attgccgtgcggcgcgtgctcacgcgcgacggcaccagcagctactacatcaacaaccag
ccggtgcgccgccgcgacgtgcaggacgtgttcctgggcaccggcctcggaccgcgcgcc
tacgcgatcatcggccagggcacgatcagccggatcatcgagtccaagcccgaggagctg
cgcctgttcctcgaagaggcggcgggcgtctccaagtacaaggagcgccggcgcgaaacc
gaaaaccgcctgggcgacacgcgcgagaacctcacgcgcgtggaagacatcctgcgcgaa
ctcaacgccaacctcgaaaagctcgagaagcaggccgaggtggctgcgcgctacaacgcg
ctgcagggcgaagccaccaaaaagcagcaccagctgtggttcctcaagcgcagcgaaagc
gatgccgaccaggccaagatcaaggccgactcggaaaaggcgatcaacgacctcgagtcg
cgcaccgccgacctgcgccgcatcgaatccgaactcgaaaccgtgcgccaggcccactac
gcggccggcgaccaggtcaaccaggcccagggcaagctctacgaagccagcgccgaagtg
ggccgcctcgaaggcgagatccgcttcgtggtcgaaggccgccagcgcgtggagcagcgg
ctggtccagctgcgcgagcagatgggccaatggggccgccgccgcgaagaggccgaggcg
gagatcgaaaccctggccggccagggcgtcgacgcggaagagcaggccgtgctgctggcc
gcgcagctcgaggaacacgacgcgcgcatgcccgagctcgaggaagccgtgcagcgcgcc
caggacgaggccaacgcccagcgcagcaccgtctcgcaggtgcagcagcagatccaggtg
ctggcggccgaccagcgcaacatcgaagagcagagccggcagctcacgcagcgcagcgaa
cgcctgcgcgccgaccagaacgcactggccgcgcccgacgaggcgcgcctgcaagccctg
caggaagagcatgcggccgcgcaggaaaccgcgagcgaggccgacgcgcgcctgcacgag
ctgcaggaatcggtgccgcagctcgacgacgaccgccgcgccaagcagcaggccgtcaac
accgaaggcgcgcgccatgccgagctctcggcgcggctcgaggcgctgcgtgcgctgcag
gaaaaggtcaagaccgatggcaagctggcgccctggctcgccaagcacgggctcgaaggc
atgcaggggctgtggagccgcatccacatcgagcagggctgggaaaacgcgctcgaagcg
gcgctgcgcgaacgcctgggcgcgctcgaggtcagccggctcgacatggtgcgcgccttc
ggcaacgatgcgccgcccgccaagctcgcgttctacagcccgcccgcggccggcgcgccg
caaggtacggccgcgctaccgcgcctgtcgagcctgctgcgcctgaacgatgcgggcctg
caggccctgctgaccgactggctgcacggctgctacaccgcgcagagtttcgaagaagcg
ctcgcgcagcgcgccacgctgcagccgggcgaagtcatctacgtgcagagcggccacgcc
gtcttctcgcacagcgtcaatttctacgcccccgattccgagcaggctggcctgctggcg
cgccagcaggaaatggaaaacctcgagcgccagctgcgtgcccaggccctcatcagcgaa
gaggcgcgcaccgcgctggtccgcgccgaagccgcctacgccgatgcggcgcagcgcctc
gtcacggcgcgccgcgaagcggccgaaacgcaatcgcgtgcgcatgaactgcaggtcgag
acgctgcgcatgacgcagctcgccgagcagacgcgcgcgcgcagcgagcagctggctgcc
gacctggccgaggtcgacgcgcagctggaagaactgcaggaaaagcgcatggcggccgaa
ggccgcttcgaagagctcgacatgcagctggccgacagccaggagcgccacgcgcagctc
gacgaacgcgtgatcgaggccggccgcgtgctggccgcgagccgcgagcagcaccgcagc
ctcgagcggcaggcgcaggaggccaccttctcgcagcgcacgctcgaagcccgccgcggc
gagctgaaccgcgcgatcgaaaccgcatcgcagcaggtgctgtcgctcaccgacgaagac
gagcgcgcccgcgccgaactcggccggctgtccgatgcggcggcccaggccggcctgcag
gacgcgctggcgctcaagctcgagcgcgaggccgcgctgggtgcggcgcgcagccagtac
gacgacctcacgctgaagctgcgcgccagcgacgaacgccggctgcagctggagcgcgaa
ctcgatccgctgcgccagcgcatcaccgaattccagctcaaggaacaggccgcgcgcctg
ggcgtcgagcaataccagcagctgctggacgacgccggcgccgacctcgaggccgttgcc
cagtcgatcgaagccgacaaggtccgcctcaccggcctgcaaggcgagatcgaccgcctg
aaccgcgaagtggtggcgctgggcgcggtcaacctggcggcgctcgacgagctcgccgtg
gccagcgagcgcaagaccttcctcgatgcgcagtccgccgacctgaacgaggccatcggc
acgctggaagacgccatccgcaagatcgacgccgagacgcgcgacctgctgggcggcacc
ttcaagatcgtcaacgagcacttcagccgcatgttccccgagctgttcggcggcggcaat
gcacggctcgtgatgaccggcgacgagatcctcgacgccggcgtgcaggtgctggcgcag
ccgcccggcaagaaaaaccagaccatccacctgctctcgggcggcgagaaggcgctcacg
gccattgcgctggtgttcgcgatcttccagctcaacccggcgcctttctgcctgctcgac
gaagtggacgcgccgctggacgatgcgaacaccgaacgctatgccaaactcgtgaccgcc
atgagccgcgaaacccagttcctcttcatcagccacaacaagatcgccatggaaatggcc
gagcagctgatcggcgtcaccatgcaggagcagggcgtctcgcgcatcgtcgcggtcgac
atggaagcggccgcctccatggtcgaggctgcttga
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