Variovorax paradoxus S110: Vapar_3031
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Entry
Vapar_3031 CDS
T00916
Name
(GenBank) Ribulose-bisphosphate carboxylase
KO
K01602
ribulose-bisphosphate carboxylase small chain [EC:
4.1.1.39
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00630
Glyoxylate and dicarboxylate metabolism
vap00710
Carbon fixation by Calvin cycle
vap01100
Metabolic pathways
vap01110
Biosynthesis of secondary metabolites
vap01120
Microbial metabolism in diverse environments
vap01200
Carbon metabolism
Module
vap_M00165
Reductive pentose phosphate cycle (Calvin cycle)
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Vapar_3031
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
Vapar_3031
Enzymes [BR:
vap01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
Vapar_3031
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RuBisCO_small
DUF6898
Motif
Other DBs
NCBI-ProteinID:
ACS19650
UniProt:
C5CPR1
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All DBs
Position
1:complement(3189240..3189659)
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AA seq
139 aa
AA seq
DB search
MRITQGTFSFLPDLSDEQISRQVEYCLGKGWAIGLEYTDDPHPRNTFWEMFGNPMFDIKD
AAGVMLELAACRKTFPQQYIRVTAFDSTHGTESVVMSFIVNRPSNEPGFRLIRTEEPGRT
IRYSLESYAVQARPEGSRY
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatcacacaaggcaccttttccttcctgcccgacctgagcgacgagcagatcagc
cgccaggtcgagtattgcctgggcaagggctgggccatcggcctcgaatacaccgacgac
ccgcatccgcgcaacaccttctgggagatgttcggcaacccgatgttcgacatcaaggat
gcggccggcgtgatgctcgaactcgcggcctgccgcaagacctttccgcagcaatacatc
cgcgtgacggccttcgattcgacgcacggcaccgagtcggtcgtgatgtccttcattgtc
aaccggccgtcgaacgaaccgggcttccgcctgatccgcaccgaggagccgggccgcacg
atccgctacagcctcgaaagctatgcggtgcaggcgcggcccgaaggcagccgctactga
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