Variovorax paradoxus S110: Vapar_3033
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Entry
Vapar_3033 CDS
T00916
Name
(GenBank) transcriptional regulator, LysR family
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vap03000
]
Vapar_3033
Transcription factors [BR:
vap03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Vapar_3033
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
PBP_like
NMT1_3
Motif
Other DBs
NCBI-ProteinID:
ACS19652
UniProt:
C5CPR3
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Position
1:3191279..3192256
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AA seq
325 aa
AA seq
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MPLSKHASFRQLATFHAVARLGSVSLAADEMHLTQPAVSIQIGTLEESAGTPLLQRTGRG
IRLTEAGELLAGYAGRILDLWREAGDEMAMLQGVFSGTLRVGAITTAEYLLPPILVNFAK
EHPKVKVKLQVGNRDEIVRMLAGQEIDIAIMGRPPAELKTDSSAFAKHPMAFLAAPSHPL
MSAAKPSIALLSDTRMLVRERGSGTRTTVERFFKDHGLPLRIGSELSSNEAIKQMCAAGF
GIAFLSMHTCVLEMNAGLLGVLPVPGNPVVRDWYVMHLASRQLPQVALAFEEYLRTHGQA
QIQQQLGTLPAARTAARKRSVRRAA
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcccctttccaagcacgcgagcttcaggcagctcgccaccttccacgccgtggcgcgg
ctcggcagcgtttcacttgctgcagatgaaatgcacctgacgcaacccgcggtgtcgata
cagatcggcacactcgaggagtcggccggcacgccgcttttgcagcgcacgggccgcggc
atccggctgaccgaggcaggcgaattgctggcgggctatgccggccgcatcctcgacctg
tggcgcgaggccggcgacgaaatggcgatgctgcaaggcgtgttctcgggcaccttgcgc
gtgggcgccatcaccacggccgagtacctgctgccgcccatcctggtgaacttcgccaag
gagcatccgaaggtgaaggtcaagctgcaggtcggcaaccgcgacgagatcgtgcgcatg
ctcgcgggccaggagatcgacatcgccatcatgggccgaccgcccgcagaactgaagacc
gactccagcgccttcgccaagcacccgatggcctttctcgcggcgccttcgcacccgctg
atgtccgcggccaagccgagcatcgccctgctctcggacacgcgcatgctggtgcgcgag
cgcggctcgggcacgcgcaccacggtcgagcgcttcttcaaggaccacggcctgccgctg
cgcatcggctccgagctgtcgagcaacgaggccatcaagcagatgtgcgccgcgggcttc
ggcattgccttcttgtcgatgcacacctgcgtgctcgagatgaacgccggcctgctgggc
gtgctgccggtgccgggcaatccggtggtgcgcgactggtacgtgatgcacctcgcgtcg
cggcaattgccgcaggtggcgctggccttcgaagaatatttgcgcacgcatggccaggcg
cagatccagcagcagctcggcacgctgccggcggcgcgtaccgcggccaggaaacgcagc
gtgcggcgcgcggcctga
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