Variovorax paradoxus S110: Vapar_3110
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Entry
Vapar_3110 CDS
T00916
Name
(GenBank) 3,4-dihydroxy-2-butanone 4-phosphate synthase
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00740
Riboflavin metabolism
vap00790
Folate biosynthesis
vap01100
Metabolic pathways
vap01110
Biosynthesis of secondary metabolites
vap01240
Biosynthesis of cofactors
Module
vap_M00125
Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
Vapar_3110
00790 Folate biosynthesis
Vapar_3110
Enzymes [BR:
vap01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
Vapar_3110
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
Vapar_3110
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Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
Motif
Other DBs
NCBI-ProteinID:
ACS19729
UniProt:
C5CPZ0
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Position
1:3270425..3271579
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AA seq
384 aa
AA seq
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MNASVTPIGAPRGTRAPAPISSVEEIVAELAAGRMVILVDEEDRENEGDIVIAADHITPE
AINFMARHARGLICLTLSREMCERLQLPPMVSRNGAKHSTAFTVSIEAAEGVTTGISAAD
RARTVQAAVARNAVASDLVQPGHIFPLQAVDGGVLMRAGHTEAGCDLAAMAGCSPASVIC
EVMNEDGTMARLPDLQIFAAEHGLKIGTIAALIEHRSRTESLVEKVGCREIQTAWGSFTA
HAFTDKPSRGVHLALVRGKWTPEDTVSVRVHEPLSVLDALEINRSLHSWSLDASLAHIAN
EGKGVAVLLNCGETAGELLAQFDGTARPAQAPERGRMDLRSYGIGAQILRECGVHKMNLL
GTPRRMPSMAAGYGLEIAGYLTKD
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcttccgtcacgcccatcggcgctccccgcggcacgcgggcacccgcgccgatt
tcctcggtcgaggagatcgtggccgagctcgccgccggccgcatggtgatcctggtggac
gaggaagaccgcgagaacgaaggcgacatcgtcattgcggccgaccacatcacgcccgag
gccatcaacttcatggcgcgccatgcgcgcgggctgatctgcctcacgctctcgcgcgag
atgtgcgagcggctgcagttgccgcccatggtgtcgcgcaacggcgccaagcattcgacg
gccttcaccgtgtccatcgaggcggccgaaggcgtgaccaccggcatctcggcggccgac
cgcgcgcgcaccgttcaggcggcggtggcgcgcaacgccgtggccagcgacctggtgcag
cccggccacatctttccgctgcaggcggtggacggcggcgtgctgatgcgcgccggccat
accgaagccggctgcgacctggccgcgatggccggctgctcgcccgcctcggtgatctgc
gaggtgatgaacgaggacggcaccatggcgcgcctgcccgacctgcagatcttcgcggcc
gaacacggcctgaagatcggcaccattgccgcgctcatcgagcaccgcagccgcaccgaa
tcgctggtcgagaaggtcggctgccgcgagatccagaccgcctggggcagcttcaccgcc
catgccttcaccgacaagccgagccgcggcgtgcacctggcgctggtgcgcggcaagtgg
acgcccgaagacacggtgtcggtgcgcgtgcacgagccgctctcggtgctcgacgcgctc
gaaatcaaccgctcgctgcactcgtggagcctggacgccagcctcgcgcacatcgcaaac
gagggcaagggcgtggccgtgctgctcaattgcggcgaaacggctggcgaactgctcgcg
caattcgacggcaccgcgcggcccgcgcaagcccccgagcgcggccgcatggacctgcgc
agctacggcatcggcgcgcagatcctgcgcgaatgcggcgtgcacaagatgaacctgctc
ggcacgccccgccgcatgccgagcatggccgcaggctacggcctcgaaattgccggctac
ctcacgaaagactga
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