Variovorax paradoxus S110: Vapar_3132
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Entry
Vapar_3132 CDS
T00916
Name
(GenBank) transcriptional regulator, LysR family
KO
K13794
LysR family transcriptional regulator, regulatory protein for tcuABC
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vap03000
]
Vapar_3132
Transcription factors [BR:
vap03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Vapar_3132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
ACS19751
UniProt:
C5CQ12
LinkDB
All DBs
Position
1:3291148..3292074
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AA seq
308 aa
AA seq
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MELRQLRYFVKVCELRSMGRAAVELGVVTSALSQQISRLEGELSTRLLQRSSTGVVPTDA
GLAFLQQAQLTLRHADDAVRAAQQARLSGHVSVGLAPTTATVLGVPLMRAMQQRYPEVRL
HMVEALSGHLTTMLHARQLDLAVLFQTDTPRRWSVAPLLAEKLFVIASPTLEGRPTGTKV
RLSQLAEVPLILPSGSHGLRATLMAAFARACIQPRIVAEVDGLALLMDAVRAGYGATVQP
GAATARHDRDDLELTQISDAHVGRRNLLVSLSDDELSPAALAARVVVADTARALVREGRW
AGASLLES
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggaactccggcaactgcgctacttcgtcaaggtttgcgaactgcgcagcatgggccgc
gcggccgtcgagctgggcgtggtcacctcggcgctgagccagcagatcagccggctcgaa
ggcgagctttccacgcgcctcttgcagcgcagctcgaccggcgtggtgcccaccgatgcc
ggcctggccttcttgcagcaggcgcagctcacgctgcgccatgccgacgatgccgtgcgc
gcggcgcagcaggcgcgcctgtcgggccatgtgagcgtgggccttgcgcccaccacggcc
accgtgctgggcgtgccgctgatgcgcgccatgcagcagcgctaccccgaggtgcggctg
cacatggtcgaggcgctgtcgggccatctcacgacgatgctgcacgcgcgccagctcgac
ctggcggtgctgttccagaccgatacgccgcggcgctggagcgtggcgccgctcctggcc
gagaagctgttcgtgatcgcatcgccgacgctggaggggcgccccacgggcaccaaggtc
cgcctgtcgcagctcgccgaggtgccgctgatcctgccgagcggcagccacggcctgcgc
gcgacgctgatggcggcctttgcgcgggcctgcatccagccgcgcatcgttgccgaggtc
gacggcctcgcgctgctgatggacgcggtgcgcgcgggctacggcgccaccgtgcagccc
ggcgccgccacggcccggcatgaccgcgacgacctggagctcacgcagatcagcgatgcg
cacgtgggccgccgcaacctgctcgtgagcctgtcggacgacgagctttcgccggccgct
ctggccgcgcgcgtggtggttgccgacacggcgcgcgccctggtgcgcgaggggcgatgg
gccggggccagtcttctcgaaagctga
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