Variovorax paradoxus S110: Vapar_3189
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Entry
Vapar_3189 CDS
T00916
Name
(GenBank) polysaccharide export protein
KO
K01991
polysaccharide biosynthesis/export protein
Organism
vap
Variovorax paradoxus S110
Pathway
vap02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Vapar_3189
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vap02000
]
Vapar_3189
Transporters [BR:
vap02000
]
Other transporters
Pores ion channels [TC:
1
]
Vapar_3189
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLBB_2
Poly_export
SLBB
Wza_C
Motif
Other DBs
NCBI-ProteinID:
ACS19807
UniProt:
C5CQW2
LinkDB
All DBs
Position
1:3361928..3363106
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AA seq
392 aa
AA seq
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MAHPAPASSLRIARAVPARTRPRIRSAALLLLPLCLAGCGVPGFGPPDSGNWGAYRSSGD
AKGEPKIVSITPELIRTMATRNPAALPADVRQLFGKAPAYTIAPGDVVGIVVYRHPELMP
TAGAVISQQTDPTGVSVAPGFIVDAEGEISFPYIGRTKIEGMTERSAAEMISSKISPFVK
DPLVSVRIQSFRSRRVYVEGEVRTPGLQIFTDVPMTLAEAINRAGSITQAGDRSRVTLTR
GERTMVIDLPLLRRLGLDPTRIPLQNGDIVNVGSRDDSRIYVMGEIQRPTALTMRDGRLS
LNEALGDAGGPALQTASTDQIYVVRNSSGDVPEVFHLDAKNPVALALADRFELQPRDVVY
IDPVPLARWNRVISLILPAAQVVNLGGTTSRR
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggcacaccccgctccggccagttccttgcgcatcgcccgcgccgttcccgcccgcacc
cgcccccgcatccgatcggcggcactgctgctgctgccgctgtgcctggccggctgcggg
gttccggggttcggtccgcccgacagcggcaactggggcgcctaccgctcgagcggcgac
gcgaagggcgagccgaagatcgtctccatcacgcccgagctgatccgcacgatggcaacg
cgcaaccccgccgcgctgccggccgatgtgcggcagctgttcggcaaggcgccggcctac
acgatcgccccgggcgacgtggtcggcatcgtggtctaccgccatcccgagctgatgccc
accgcgggcgcggtcatctcgcagcagacggacccgaccggggtgagcgtggcgcccggc
ttcatcgtcgatgccgagggcgagatcagctttccctacatcggccgcaccaagatcgag
ggcatgacggagaggtccgccgccgagatgatctccagcaagatctcgcccttcgtcaag
gatccgctcgtgagcgtcaggatccagtcgttccgcagccggcgcgtctatgtggagggc
gaggtccgcacgccgggcctgcagatcttcaccgacgtgccgatgacgctggccgaggcc
atcaaccgcgccggcagcatcacgcaggcgggcgaccgttcgcgcgtgaccctgacgcgc
ggggagcgcacgatggtgatcgacctgccgctgcttcggcgcctggggctcgacccgacc
cgcatcccgctgcagaacggcgacatcgtgaacgtgggcagccgcgacgacagccgcatc
tacgtgatgggcgagatccagcgcccgacggccctgacgatgcgcgacggccgcctgagc
ctgaacgaggcgctgggcgatgcgggcggcccggcgctgcagaccgcgtcgaccgaccag
atctacgtggtgcgcaattcgagcggcgacgtgcccgaggtgttccacctcgatgcgaag
aacccggtggcgctggcgctggccgaccgcttcgagctgcagccgcgcgacgtggtctac
atcgaccccgtgccgctggcgcgctggaaccgcgtgatcagcctgatccttcccgccgcg
caggtcgtgaacctcggcggcaccaccagccgccgctga
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