Variovorax paradoxus S110: Vapar_3223
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Entry
Vapar_3223 CDS
T00916
Name
(GenBank) ABC transporter related
KO
K18893
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
vap
Variovorax paradoxus S110
Pathway
vap02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Vapar_3223
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vap02000
]
Vapar_3223
Transporters [BR:
vap02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Vapar_3223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
MMR_HSR1
RsgA_GTPase
AAA_22
AAA_29
AAA
AAA_21
AAA_16
Dynamin_N
Septin
Motif
Other DBs
NCBI-ProteinID:
ACS19841
UniProt:
C5CQZ6
LinkDB
All DBs
Position
1:3401626..3403488
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AA seq
620 aa
AA seq
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MFRFFEKLLHPYPAAEPAPPPTGFFAFLWACTQGLRLKMAVMAALTAAISGFEALLFAIL
GRIVDWLGGQVPSRLWAERGDTLAWLAALLVISIGVVALQTIVKHQTLAVNLPMRLRWNF
HRVMLGQSMAFYQDEFAGRITAKVMQTALAVRDTLFVLADVVVAMGVYVVTIIVLVTVLD
VQLVLPFIVWLVLYAAALMYFVPRLGKVGKAQADARALMTGRVTDAYTNIATVKLFSHTQ
REAGFAREAMREFMYTGYGQMRLVSAFEIVNHTLSMGLTAGMAGTALWLWSNGTVGVGAV
AAATAMALRLQGMSHWIMWEMTSLFENIGTVQDGMKTLSRPRTVLDAPDAGVLEVPHGEV
RFEHASFRYADAGRRVIDDLNLVVRPGEKIGLVGRSGAGKSTLVNLLLRFHDLESGRILI
DGRDIAQVTQDSLRSHIGMVTQDTSLMHRSVADNIAYGRPDATPAQIEAAARRAEAHDFI
QTLGDASGRRGYEAHVGERGVKLSGGQRQRVAIARVMLKDAPILLLDEATSALDSEVEAA
IQQSLYRLMEGKTVIAIAHRLSTIAAMDRLIVLDEGRVVEEGDHRTLMAQGGLYARLWAH
QSGGFLGDDLEEEDGEALRA
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
ttgttccgtttcttcgaaaaactgctccatccctatcccgcggccgaacccgcgcctccg
ccgacgggcttcttcgcattcctgtgggcctgcacccagggcctgcgcctcaagatggcc
gtcatggcggcgctcaccgcggccatctcgggcttcgaggcgctgctgttcgcgatcctc
gggcgcatcgtcgactggctcggcggccaggtgccgtcgcggctgtgggccgaacgcggc
gacacgctggcgtggctggccgcgctgctggtgatcagcatcggcgtggtcgcgctgcag
accatcgtcaagcaccagacgctggcggtgaacctgccgatgcgcctgcgctggaacttc
caccgggtgatgctgggccagagcatggccttctaccaggacgagttcgcgggccgcatc
acggccaaggtgatgcagaccgcgctggcggtgcgcgacaccctgttcgtgctggccgac
gtggtggtggccatgggcgtgtacgtggtgaccatcatcgtgctggtgaccgtgctcgac
gtgcagctggtgctgcccttcatcgtctggctggtgctctatgcggctgcgctgatgtac
ttcgtgccgcgcctgggcaaggtgggcaaggcgcaggccgacgcgcgcgcgctgatgacc
gggcgcgtgaccgacgcctacaccaacatcgccaccgtcaagctgttctcgcacacccag
cgcgaggccggtttcgcgcgcgaggcgatgcgcgagttcatgtacacgggctacggccag
atgcggctggtgagcgccttcgagatcgtcaaccacacgctcagcatgggcctgaccgcg
ggcatggccggcaccgcgctgtggctctggtcgaacggcacggtgggcgtgggcgcggtg
gctgcggccaccgcgatggcgctgcgcctgcagggcatgtcgcactggatcatgtgggag
atgaccagcctgttcgagaacatcggcaccgtgcaggacggcatgaagacgctgtcgcgc
ccgcgcaccgtgctcgatgcgcccgatgccggcgtgctcgaggtgccgcacggcgaggtg
cgcttcgagcacgcgagcttccgctatgcggatgcgggccgccgcgtcatcgacgatctg
aacctggtggtgcgcccgggcgagaagatcggcctggtcgggcgctcgggcgcgggcaag
tcgacgctggtcaacctgctgctgcgcttccatgacctggaaagcggccgcatcctgatc
gacgggcgcgacatcgcgcaggtgacgcaggattcgctgcgcagccacatcggcatggtc
acgcaggacacctcgctgatgcaccgctcggtggccgacaacatcgcctacggccggccc
gatgcaaccccggcccagatcgaggccgccgcgcggcgcgccgaggcgcacgacttcatc
cagacgctgggcgacgccagcggccggcgcggctacgaggcgcatgtgggcgagcgcggc
gtgaagctctcgggcggccagcgccagcgcgtggccattgcgcgcgtgatgctcaaggac
gcgccgatcctgctgctcgacgaggccaccagcgcgctcgactccgaggtggaggccgcc
atccagcagagcctctaccggctgatggaaggcaagaccgtgatcgcgatcgcgcaccgg
ttgtcgaccatcgcggccatggaccggctcatcgtgctcgacgaaggccgcgtggtggaa
gaaggcgaccaccgcacgctgatggcgcagggcgggctctatgcgcggctgtgggcgcac
cagagcggcggcttcctgggcgacgacctcgaggaagaagacggcgaagcgctgcgggcc
tga
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