Variovorax paradoxus S110: Vapar_3228
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Entry
Vapar_3228 CDS
T00916
Name
(GenBank) channel protein, hemolysin III family
KO
K11068
hemolysin III
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
vap02042
]
Vapar_3228
Bacterial toxins [BR:
vap02042
]
Type II toxins: Membrane damaging toxins
Pore-forming toxins, Other
Vapar_3228
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Motif
Pfam:
HlyIII
Motif
Other DBs
NCBI-ProteinID:
ACS19846
UniProt:
C5CR01
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All DBs
Position
1:3407297..3407917
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AA seq
206 aa
AA seq
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MYPGERLNGYSHLLGLVLALAATALLLAKTLPTGDAARIAGALVFSLSAVLLYAASTLFH
STRGPRKRFWERVDHCAIYLLIAGTYTPFALVTLHGLWGWLLMAAVWGAALFGIGRELLQ
AGGADSKPPLALYIAMGWLGVLAAVPLAARLDSGGLAWLLAGGVLYTVGTVFYRNRRGFR
HAHGAWHLFVLAGTASHFVSVGWFVL
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgtaccccggcgaacggctcaacggatacagccatctgctgggcctggtgcttgcactc
gcggccaccgcgctgctgctggccaagaccctgcccaccggcgacgccgcgcggattgcc
ggcgcgctggtgttctcgctctcggccgtgctgttgtatgcggcctccaccctgttccac
agcacccggggaccgcgcaagcgcttctgggagcgcgtggaccactgcgccatctacctc
ttgatcgcgggcacctacacgccgttcgcgctggtcacgctgcacgggctctggggctgg
ctgctgatggccgccgtgtggggcgctgcgcttttcggcatcggacgcgagctgctgcag
gcaggcggcgcggactcgaagccgccgctggcgctctacatcgcgatgggctggctcggc
gtgctggccgcggtgccgctggccgcgcggctcgacagcggcggccttgcgtggctgctg
gccggcggcgtgctctacaccgtgggcacggtgttctatcgcaaccggcggggcttccgg
catgcgcacggcgcctggcacctgttcgtgctcgcgggcactgcaagccacttcgtgtcg
gtgggctggttcgtgctgtga
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