Variovorax paradoxus S110: Vapar_3249
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Entry
Vapar_3249 CDS
T00916
Name
(GenBank) transcriptional regulator, LysR family
KO
K03576
LysR family transcriptional regulator, regulator for metE and metH
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vap03000
]
Vapar_3249
Transcription factors [BR:
vap03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Vapar_3249
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_5
Motif
Other DBs
NCBI-ProteinID:
ACS19867
UniProt:
C5CR22
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All DBs
Position
1:3424669..3425595
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AA seq
308 aa
AA seq
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MLQSILEIRHLRTLVALRDTGSLVRAAQLLNLTQSALSHQIKLLEDRYGAQLFERKSVPP
QFSTTGLRLLQLADAALPLVEEAERDVARLALGRSGQLRIVVECHTCFDWLMPAMDAFRQ
RWPEIELDIVSGFHPDPIALVMQNRAEVAIVSEQDPDETVDYHALFRFEIVALLANDHAL
TAKPHLTARHFAGQTLITYPVPDEMLDIVRQVLAPAGVAPAHRRTTELTVAMLQLVASGR
GVATLPLWAVQNYLDRGYVTARRVGARGLTGRLYMACTQGTSNQPWLADFVRITRESCFK
SLPGIELL
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgttgcagtcgatcctggagatacgccacctgcgcacgctcgttgcgctgcgcgacacc
ggcagcctggtgcgcgcggcgcagttgctgaacctcacgcagtcggcgctgtcgcaccag
atcaagctgctcgaagaccgctacggcgcgcagctcttcgagcgcaagtcggtgccgccg
cagttcagcaccacgggactgcggctgttgcagctggccgatgccgcgctgccgctggtg
gaggaagccgagcgcgacgtggcgcgtctggcgctgggccgcagcgggcagctgcgcatc
gtggtcgaatgccacacctgcttcgactggctgatgccggccatggatgccttccgccag
cgctggcccgagatcgagctggacatcgtctcgggcttccaccctgacccgatcgcgctg
gtgatgcagaaccgcgccgaggtggcgatcgtctccgagcaggaccccgacgaaaccgtg
gactaccacgcgctgttccgcttcgagatcgtcgcgctgctcgccaacgaccatgcgctg
acagccaagccgcatctcacggcgcgccactttgccggccagacgctcatcacctacccc
gtgcccgacgagatgctggacatcgtgcgccaggtgctggcgccggccggcgtggcgccc
gcgcaccggcgcacgaccgaactcacggtggcgatgctgcagctggtggccagcgggcgc
ggcgtagccacgctgccgttgtgggcggttcagaactacctggaccgcggctatgtcacg
gcgcggcgcgtgggcgcccggggcctcacggggcggctgtacatggcctgcacgcagggc
acgtccaatcagccgtggctggcggacttcgtgcgcatcacgcgcgagagctgcttcaag
agcctgcccgggatcgagctgctttga
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