KEGG   Variovorax paradoxus S110: Vapar_3267
Entry
Vapar_3267        CDS       T00916                                 
Name
(GenBank) pyruvate carboxyltransferase
  KO
K01640  hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
Organism
vap  Variovorax paradoxus S110
Pathway
vap00280  Valine, leucine and isoleucine degradation
vap00650  Butanoate metabolism
vap00907  Pinene, camphor and geraniol degradation
vap01100  Metabolic pathways
vap01120  Microbial metabolism in diverse environments
vap04146  Peroxisome
Module
vap_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:vap00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00650 Butanoate metabolism
    Vapar_3267
  09105 Amino acid metabolism
   00280 Valine, leucine and isoleucine degradation
    Vapar_3267
  09109 Metabolism of terpenoids and polyketides
   00907 Pinene, camphor and geraniol degradation
    Vapar_3267
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    Vapar_3267
Enzymes [BR:vap01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.3  Oxo-acid-lyases
    4.1.3.4  hydroxymethylglutaryl-CoA lyase
     Vapar_3267
SSDB
Motif
Pfam: HMGL-like Radical_SAM
Other DBs
NCBI-ProteinID: ACS19885
UniProt: C5CR40
LinkDB
Position
1:complement(3439883..3440866)
AA seq 327 aa
MKEGKGKRLFINEVATRDGFQMESRFIPTDDKIALIDRLGTLGYAKIEVTSFTSAKAIPA
LRDGEEVMQRIARRPGVVYTALVPNLRGAERALESRIGEFNVVMSVSETHNLSNLRMTRE
QSFAQLAEVIALARQAGVPVNVSLSCVFGCPMEGEVPLAVVQEWIDRFAALQVQGVTLCD
TTGMAFPTQVQAVCEAVMARHPGLQWTAHFHNTRGMGLANTVAAVESGIERLDMSLGGIG
GCPYAPGATGNVATEDVVHMLQCMGYDTGMDLGGLIAAASELEALVEHDLPSQVSRAGHR
LTRHSPPADFNDIAARAHARRAKELNP
NT seq 984 nt   +upstreamnt  +downstreamnt
atgaaagaaggcaagggcaagcggctcttcatcaacgaagtggccacgcgcgacggcttc
cagatggagagccgcttcattcccaccgacgacaagatcgcgctgatcgaccgcctcggc
acgctcggctacgccaagatcgaggtgacctcgttcacctccgccaaggcgatcccggcg
ctgcgcgacggcgaggaagtgatgcagcgcatcgcgcgccggccgggcgtggtctacacc
gcgctggtgccgaacctgcgcggtgccgagcgtgcgctggagagccgcatcggcgaattc
aacgtcgtcatgtcggtgagcgaaacccacaacctcagcaacctgcgcatgacgcgcgag
cagtcgttcgcgcagctggccgaggtcatcgcgctggccaggcaggccggcgtgcccgtg
aacgtgtcgctctcttgcgtgttcggctgcccgatggaaggcgaggtgcccctggccgta
gtccaggaatggatcgaccgcttcgcggcgctgcaagtgcagggcgtgacgctgtgcgac
accacgggcatggcttttccgacgcaggtgcaggccgtctgcgaagccgtgatggcaagg
caccccgggctgcaatggacggcgcacttccacaacacgcgcggcatggggctcgcgaac
acggtggcggcggtcgagtcgggcatcgagcggctcgacatgtcgctgggcggcatcggc
ggctgcccgtatgcgcccggcgccaccggcaacgttgccaccgaggacgtggtgcacatg
ctgcaatgcatgggctacgacaccggcatggatctgggcggactgatagctgccgcctcg
gaactcgaagcgctggtggagcacgacttgccgagccaggtttcgcgcgccggccaccgg
ctcacgcggcattcgccgccggcggatttcaacgacatcgcggcgcgtgcgcatgcgcgt
cgagccaaggagctgaacccatga

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