Variovorax paradoxus S110: Vapar_3267
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Entry
Vapar_3267 CDS
T00916
Name
(GenBank) pyruvate carboxyltransferase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00280
Valine, leucine and isoleucine degradation
vap00650
Butanoate metabolism
vap00907
Pinene, camphor and geraniol degradation
vap01100
Metabolic pathways
vap01120
Microbial metabolism in diverse environments
vap04146
Peroxisome
Module
vap_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
Vapar_3267
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Vapar_3267
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Vapar_3267
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Vapar_3267
Enzymes [BR:
vap01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
Vapar_3267
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Motif
Pfam:
HMGL-like
Radical_SAM
Motif
Other DBs
NCBI-ProteinID:
ACS19885
UniProt:
C5CR40
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All DBs
Position
1:complement(3439883..3440866)
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AA seq
327 aa
AA seq
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MKEGKGKRLFINEVATRDGFQMESRFIPTDDKIALIDRLGTLGYAKIEVTSFTSAKAIPA
LRDGEEVMQRIARRPGVVYTALVPNLRGAERALESRIGEFNVVMSVSETHNLSNLRMTRE
QSFAQLAEVIALARQAGVPVNVSLSCVFGCPMEGEVPLAVVQEWIDRFAALQVQGVTLCD
TTGMAFPTQVQAVCEAVMARHPGLQWTAHFHNTRGMGLANTVAAVESGIERLDMSLGGIG
GCPYAPGATGNVATEDVVHMLQCMGYDTGMDLGGLIAAASELEALVEHDLPSQVSRAGHR
LTRHSPPADFNDIAARAHARRAKELNP
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaggcaagggcaagcggctcttcatcaacgaagtggccacgcgcgacggcttc
cagatggagagccgcttcattcccaccgacgacaagatcgcgctgatcgaccgcctcggc
acgctcggctacgccaagatcgaggtgacctcgttcacctccgccaaggcgatcccggcg
ctgcgcgacggcgaggaagtgatgcagcgcatcgcgcgccggccgggcgtggtctacacc
gcgctggtgccgaacctgcgcggtgccgagcgtgcgctggagagccgcatcggcgaattc
aacgtcgtcatgtcggtgagcgaaacccacaacctcagcaacctgcgcatgacgcgcgag
cagtcgttcgcgcagctggccgaggtcatcgcgctggccaggcaggccggcgtgcccgtg
aacgtgtcgctctcttgcgtgttcggctgcccgatggaaggcgaggtgcccctggccgta
gtccaggaatggatcgaccgcttcgcggcgctgcaagtgcagggcgtgacgctgtgcgac
accacgggcatggcttttccgacgcaggtgcaggccgtctgcgaagccgtgatggcaagg
caccccgggctgcaatggacggcgcacttccacaacacgcgcggcatggggctcgcgaac
acggtggcggcggtcgagtcgggcatcgagcggctcgacatgtcgctgggcggcatcggc
ggctgcccgtatgcgcccggcgccaccggcaacgttgccaccgaggacgtggtgcacatg
ctgcaatgcatgggctacgacaccggcatggatctgggcggactgatagctgccgcctcg
gaactcgaagcgctggtggagcacgacttgccgagccaggtttcgcgcgccggccaccgg
ctcacgcggcattcgccgccggcggatttcaacgacatcgcggcgcgtgcgcatgcgcgt
cgagccaaggagctgaacccatga
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