Variovorax paradoxus S110: Vapar_3345
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Entry
Vapar_3345 CDS
T00916
Name
(GenBank) putative sugar ABC transporter, substrate-binding protein
KO
K10439
ribose transport system substrate-binding protein
Organism
vap
Variovorax paradoxus S110
Pathway
vap02010
ABC transporters
vap02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Vapar_3345
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Vapar_3345
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vap02000
]
Vapar_3345
Transporters [BR:
vap02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
Vapar_3345
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Motif
Other DBs
NCBI-ProteinID:
ACS19963
UniProt:
C5CS12
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All DBs
Position
1:3524612..3525733
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AA seq
373 aa
AA seq
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MKKKSVVPARTVAAAVLALCAAALAPKAMADDFLDAAKKKVEIATMTKEKWDGPTTGPKA
AAGKTIVFVAGDMKNGGIVGVSKGVEEAARAIGWTVRVIDGQGTVSGRTAALNQALAVKP
AGIVVGGFDTTEQKAAFSGAAKSGIPLVGWHSGEQPGPNDKAGLFANVTTVTDDVADVAA
SWVVADSGGKAGVVIFTDSQYAIALYKARAMEAVIKKCGGCTVLSFEDSPISESSTRMPQ
LTTSLLQRFGDKWTHSLAINDLYFDFMGPSLTAAGKKGDGSPKAVSAGDGSEAAYQRIRT
QRYQAGTVPEPLNMQGWQIVDELNRAFAKEKWSGYVPKVHLVTAGNVGKDGGPKNVFDPD
NGYRTQYKALWGK
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaagagtgtggttcccgcgcgcaccgtcgccgccgccgtgctggcgctgtgc
gccgccgcgctggcgcccaaggcgatggccgacgacttcctggatgccgcgaagaagaag
gtcgagatcgccaccatgaccaaggagaagtgggacggccccaccaccggccccaaggcc
gccgcgggcaagaccatcgtcttcgtcgcgggcgacatgaagaacggcggcatcgtgggc
gtgagcaagggcgtggaggaagcggcgcgcgccatcggctggacggtgcgcgtcatcgac
ggccagggcacggtcagcgggcgcaccgcggcactcaaccaggcgctggccgtgaagccc
gcgggcatcgtggtcggcggcttcgacaccaccgagcagaaggcggcgttctcgggcgcg
gccaagtcgggcattcctctggtcggctggcattcgggcgagcagccgggcccgaacgac
aaggcgggcctcttcgccaacgtgaccaccgtgacagacgacgtggccgacgtcgccgcc
tcgtgggtggtggccgattcgggcggcaaggcgggcgtggtgatcttcaccgactcgcag
tacgcgattgcgctctacaaggcgcgcgcgatggaggccgtcatcaagaagtgcggcggc
tgcaccgtgctgagcttcgaggacagcccgatctccgaaagctcgacccgcatgccgcag
ctcaccacctcgctgctgcagcgctttggcgacaagtggacgcactcgctggccatcaac
gacctgtacttcgacttcatgggcccctcgctcaccgcggcgggcaagaagggcgacgga
tcgcccaaggcggtgtcggccggcgacggctccgaggccgcctaccagcgcatccgcacg
cagcgctaccaggccggcacggtgcccgagccgctcaacatgcagggctggcagatcgtc
gacgagctcaaccgcgccttcgccaaggagaagtggtcgggctacgtgcccaaggtgcac
ctggtgacggcgggcaacgtgggcaaggacggcgggccgaagaatgtgttcgatccggac
aacggctatcggacgcagtacaaggctctgtggggcaagtag
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