Variovorax paradoxus S110: Vapar_3375
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Entry
Vapar_3375 CDS
T00916
Name
(GenBank) MscS Mechanosensitive ion channel
Organism
vap
Variovorax paradoxus S110
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Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
ACS19992
UniProt:
C5CS41
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Position
1:complement(3554424..3555704)
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AA seq
426 aa
AA seq
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MNFNDFTQRLGQVDARGLGIELAALVACVVLAWVATRWFGRDQPKDSIWFGERTFDGLLF
PLLALVFAELARRLVSGYQPVLVLRIGVSVFLSLAVIRLFARVMRAVFPASNLVRLLERT
ISWLAWMAAILWIVGLLPPVLAELDGITLAFGKTSVSLQTIIQGVLSAGLVLVIALWIAA
TIEKRILREAVTDLSMRKVASNAVRAILLLVGLLFALSAVGVDLTALSVLGGALGVGLGF
GLQKLAANYVSGFVILLERSIRIGDNVKVDTFEGRITDIKTRYTLIRAGNGREAIVPNES
LITSRVENLSMADRKFNITTSIVVGYDSDVAQVQAILCAAAKAQARVMTDPEPVTYLASF
APDGLEFTLNFWVADPDKGKDNVRSAINIAILEGLRSAGVDIPYPQRVLRVESLPPGVSA
TREAAV
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcaacgatttcacacaacgcctgggccaggtcgacgcacgcggcctgggcatc
gagctggcggcactggtcgcctgcgtggtcctggcctgggtggccacccgctggttcggg
cgcgaccagccgaaggattccatctggttcggcgagcgcaccttcgacgggctcttgttc
ccgctgctggcgctggtcttcgccgagctggcccggcgcctggtgagcggctaccagccc
gtactggtgctgcgcatcggggtgtcggtgttcctgtcgctggcggtcatccggctgttc
gcgcgcgtgatgcgggcggtctttcccgcctccaacctggtgcggctgctggagcgcacg
atctcgtggctcgcctggatggccgccatcctctggatcgtcgggctgctgccgccggtg
ctggccgagctcgacggcatcacgctggccttcggcaagacgagcgtcagcctgcagacc
atcatccagggcgtgctgtcggccgggctggtgctggtgatcgcgctgtggattgccgcc
accatcgagaagcgcatcctgcgcgaggccgtgaccgacctgtcgatgcgcaaggtggcc
tcgaacgcggtgcgcgccatcctgctgctggtgggcctgctgttcgcgctgtcggcggtg
ggggtcgacctgacggcgctctcggtgctgggcggcgcgctgggcgtaggcctgggcttc
gggctgcagaagctggcggccaactacgtgagcggcttcgtgatcttgctggagcgctcc
atccgcatcggcgacaacgtcaaggtcgacaccttcgagggccgcatcaccgacatcaag
acccgctacacgctcatccgcgcgggcaacgggcgcgaggccatcgtgccgaacgagtcg
ctcattaccagccgcgtcgagaacctctcgatggcggaccgcaagttcaacatcacgacc
agcatcgtggtgggctacgacagcgacgtggcgcaggtgcaggccatcctgtgcgcggcg
gccaaggcccaggcccgggtgatgaccgaccccgagcccgtgacttatctcgccagcttc
gcgcccgacgggctggagttcacgctgaacttctgggtggccgaccctgacaagggcaag
gacaacgtgcgctcggccatcaacatcgccattctcgagggcctgcgcagcgcgggcgtg
gacattccctatccgcagcgcgtgctgcgggtggagtcgctgccgccgggcgtttccgcc
acgcgcgaggctgccgtataa
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