KEGG   Variovorax paradoxus S110: Vapar_3425
Entry
Vapar_3425        CDS       T00916                                 
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing)
  KO
K02621  topoisomerase IV subunit A [EC:5.6.2.2]
Organism
vap  Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:vap00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vap03032]
    Vapar_3425
   03036 Chromosome and associated proteins [BR:vap03036]
    Vapar_3425
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:vap02048]
    Vapar_3425
Enzymes [BR:vap01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     Vapar_3425
DNA replication proteins [BR:vap03032]
 Prokaryotic type
  DNA Topoisomerases
   Vapar_3425
Chromosome and associated proteins [BR:vap03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    Vapar_3425
Prokaryotic defense system [BR:vap02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    Vapar_3425
SSDB
Motif
Pfam: DNA_topoisoIV DNA_gyraseA_C CENPH DUF4890
Other DBs
NCBI-ProteinID: ACS20042
UniProt: C5CST5
LinkDB
Position
1:complement(3612199..3614595)
AA seq 798 aa
MDDSQPPLDLQGPTDGDTTLTLADYAQTAYLEYALSVVKGRALPDVSDGQKPVQRRILYS
MSRMGLGFGGANGTVGAKPVKSARVVGDVLGRFHPHSDQAAYDALVRMAQDFSQRYPLAD
GQGNFGSRDGDGAAAMRYTEARLARITSLLLDEIDEGTVDFIPNYDGSTEEPRLLPARLP
FTLLNGASGIAVGLATEIPSHNLREIADACVALIKSNGKLSDEELLQIVPGPDYPGGAQI
ISGPADIADAYRTGRGSLKVRARWKIEDLARGQWQLVVNELPPGVSTQKVLEEIEEITNP
KVKAGKKALSADQTQLKAAMLSVLDVVRDESSKDAAVRLVFEPKTSRISQDEFITTLLAQ
TSLETSSPINLTMVGIDGKPTQKSLRQMLNEWIAFREVTVEKRSRFRLNKVMDRIHILEG
RQLVLLNIDEVIAIIRAAEDPKAALIARFNLSEVQAEDILEIRLRQLARLEGIKIQQQLD
ELRTEQKKLEDILGSPAALRRLLVKEIEADAKTFEDPRRTLIQAEKRAVAEVKVVDEPVT
VIVSQKGWVRAQKGWASEKAAGNGGTAPEYSFKSGDTLYGAFECRSVDTLLVFGSAKDKS
VRVYTVPVASLPGARGDGQPVTTLIELDAGTHVTHFFAGPVGASVLLANTGGYGFIATVE
NMMSRQRGGKAFIDVGEGEQLCRPSLVGGASGAEPMPAATHVACASTGGRILTFDIAELK
SLPKGGRGLTLIDLDAKDTLAGAAAYTRSVKIEGIGRGGKERDETLEIRTLNNARGSRAR
KGKAADLGFKPTSIVRVL
NT seq 2397 nt   +upstreamnt  +downstreamnt
atggacgactcccaacctccgctcgatctccagggtcccaccgacggcgacaccaccctc
acactggccgactacgcacagaccgcctacctcgaatacgcgctcagcgtggtcaagggc
cgcgcactgcccgacgtgtccgacggccagaagccggtgcagcggcgcatcctgtattcg
atgtcgcgcatgggcctgggcttcggcggcgccaacggcaccgtgggcgccaagccggtc
aagagcgcgcgcgtggtcggcgacgtgctcggccgcttccacccgcacagcgaccaggcc
gcctacgacgcgctggtgcgcatggcgcaggatttttcgcagcgctatcccctggccgac
ggccagggcaacttcggcagccgcgacggcgacggcgccgcggccatgcgctacaccgag
gcgcgcctggcccgcatcaccagcctgctgctcgacgagatcgacgaaggcacggtcgac
ttcatccccaactacgacggcagcaccgaggagccgcgccttctgcccgcgcggctgccc
ttcacgctgctcaacggcgcgagcggcatcgcggtcggcctggccaccgagatcccgagc
cacaacctgcgcgagattgccgatgcctgcgtggcgctgatcaagtcgaacggcaagctc
agcgacgaggaactgctgcagatcgtgcccggtcccgactacccgggcggcgcgcagatc
atcagcggcccggccgacatcgccgacgcctaccgcaccggccgcggctcgctcaaggtg
cgcgcgcgctggaagatcgaggacctcgcgcgcggccagtggcagctggtggtcaacgag
ctgccgccgggcgtcagcacgcagaaggtgctcgaggaaatcgaggaaatcaccaatccg
aaggtcaaggccggcaagaaggcgctctccgccgaccagacccagctcaaggccgcgatg
ctctcggtgctcgacgtggtgcgcgacgagtccagcaaggacgccgcggtgcgcctggtg
ttcgagcccaagacctcgcgcatcagccaggacgagttcatcaccacgctgctcgcgcag
acctcgctcgagacctcgtcgccgatcaacctcacgatggtgggcatcgacggcaagccc
acgcagaagtcgctgcgccagatgctcaacgagtggatcgcgttccgcgaggtcaccgtc
gagaagcgctcgcggttccgcctgaacaaggtgatggaccgcatccacatcctcgagggg
cggcagctggtgctgctcaacatcgacgaggtgatcgcgatcatccgcgcggccgaggac
ccgaaggctgcgctcatcgcgcgcttcaacctctccgaagtgcaggcggaagacatcctt
gaaatccggctgcgccagcttgcgcggctcgaaggcatcaagatccagcagcagctcgac
gagttgcgtacggagcagaaaaagctcgaagacatcctcggcagccccgcggcactgcgc
cgcctgctggtgaaggaaatcgaggccgatgccaagaccttcgaagacccgcgccgcacg
ctgatccaggccgagaagcgcgccgtggccgaagtgaaggtggtcgacgagcccgtgacc
gtgatcgtctcgcagaagggctgggtccgcgcgcagaagggctgggcgagcgagaaggcc
gccggcaacggaggcactgcgcccgaatacagcttcaagtccggcgacacgctctacggc
gccttcgaatgccgcagcgtcgacacgctgctggtgttcggctcggccaaggacaagagc
gtgcgcgtctacaccgtgcccgtggcctcgctgcccggcgcgcgcggcgacggccagccc
gtgaccacgctcatcgagctcgatgccggcacgcacgtcacgcacttcttcgcgggtccg
gtgggcgccagcgtgctgctggccaacaccggcggctatggcttcattgccaccgtcgag
aacatgatgtcgcgccagcgcggcggcaaggccttcatcgacgtgggcgagggcgagcag
ctgtgccgcccgtccctggtgggcggcgcgagcggcgccgagccgatgccggccgccacg
cacgtggcctgcgcctcgaccggcggccgcatcctgaccttcgacatcgccgagctcaag
agcctgcccaagggcggccgtgggctcacgctgatcgacctcgacgccaaggacacgctg
gcgggtgccgcggcctacacgcgcagcgtgaagatcgaaggcatcggccgcggcggcaag
gagcgcgatgaaaccctggaaatccgcacgctcaacaatgcgcgcggcagccgagcgcgc
aagggcaaggcggccgacctcggcttcaagccgacgagcatcgtgcgggtgctgtga

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