KEGG   Variovorax paradoxus S110: Vapar_3428
Entry
Vapar_3428        CDS       T00916                                 
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing)
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
vap  Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:vap00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vap03032]
    Vapar_3428
   03036 Chromosome and associated proteins [BR:vap03036]
    Vapar_3428
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:vap02048]
    Vapar_3428
Enzymes [BR:vap01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     Vapar_3428
DNA replication proteins [BR:vap03032]
 Prokaryotic type
  DNA Topoisomerases
   Vapar_3428
Chromosome and associated proteins [BR:vap03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    Vapar_3428
Prokaryotic defense system [BR:vap02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    Vapar_3428
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim HATPase_c_3
Other DBs
NCBI-ProteinID: ACS20045
UniProt: C5CST8
LinkDB
Position
1:complement(3616721..3618718)
AA seq 665 aa
MATPPKTPPSSSSASSGYSEGSIRVLKGLEPVKQRPGMYTRTDNPLHVIQEVLDNAADEA
LAGHGKKIKVTLHADNSVSVEDDGRGIPFGLHPEEKAPVVELVYTRLHAGGKFDKGSGGA
YSFSGGLHGVGVSVTNALSKRLEVTTHREGSVARLAFSGGDVIEPLQVRKLEAGERKQGT
TVRAWPDAKYFETAALPMAELTHLLRSKAVLMPGVSVTLTVEKTKETQQWLYKGGLSDYL
MQTLNGDPVIPLFEGSGHADKNADNFAEGEGADWCVAFTEDGQPVRESYVNLIPTSAGGT
HESGLRDGLFTAVKGFIELHSLLPKGVKLLPEDVFARASYVLSAKVLDPQFQGQIKERLN
SRDAVRLVSSFVRPALELWLNQHVDYGRRLAELAIKAAQTRQRAGQKVEKRKGSGVAVLP
GKLTDCESKDISHNEVFLVEGDSAGGSAKMGRDKESQAILPLRGKVLNTWEVERDRLFAN
TEIHDISVAVGVDPHGPTDSPDMSGLRYGKICILSDADVDGSHIQVLLLTLFFRHFPKLI
EAGHVYVAKPPLFRVDAPARGKKPASKVYALDEGELTATLDKLRKDGVREGAWSISRFKG
LGEMSAEQLWETTLNPDTRRLMKVQLGRFDFSSTQGEITKLMGKGEAAARRELMELRADD
VDIDV
NT seq 1998 nt   +upstreamnt  +downstreamnt
atggcgactccccccaagactccccccagttcatcgtccgcgtcctccgggtactcggaa
ggctccatccgcgtgctcaagggcctggagcccgtgaagcagcgcccgggcatgtacacc
cggaccgacaacccgctgcacgtcatccaggaagtgctcgacaacgccgccgacgaggcg
ctggcgggccacggcaagaagatcaaggtcacgctgcatgccgacaactcggtcagcgtc
gaggacgacggccgcggcattcccttcggcctgcatcctgaagaaaaagcccccgtggtc
gaactggtctacacccggctgcacgccggcggcaagttcgacaagggctcgggcggcgcc
tacagcttctcgggcggcctgcacggcgtgggcgtgtcggtgaccaacgcgctgtcgaag
cggctcgaagtcacgacccaccgcgaaggctcggtcgccaggctggccttcagcggcggc
gacgtgatcgagccgctgcaggtgcgcaagctcgaagccggcgagcgcaagcagggcacc
accgtgcgcgcctggcccgacgccaagtatttcgagaccgccgcgctgccgatggccgag
ctcacccacctcttgcgcagcaaggccgtgctgatgccgggcgtgagcgtcacgctcacg
gtcgagaagaccaaggaaacccagcagtggctctacaagggcggcctgagcgactacctg
atgcagacgctcaacggcgaccccgtgatcccgctgttcgaaggcagcggccacgccgac
aagaacgccgacaacttcgccgagggcgagggcgccgactggtgcgtggccttcaccgaa
gacggccagccggtgcgcgagagctacgtcaacctgattcccaccagcgccggcggcacg
cacgagagcggcctgcgcgacggcctgttcaccgcggtgaagggcttcatcgagctgcac
tcgctgctgcccaagggcgtgaagctgctgcccgaggacgtgttcgcacgcgcctcgtac
gtgctgagcgccaaggtgctcgacccccagttccagggccagatcaaggaacgcctcaat
tcgcgcgatgccgtgcgcctggtgtcgagcttcgtgcgaccggcgctcgagctctggctc
aaccagcacgtcgactacggccgcaggcttgccgagctggccatcaaggccgcgcagacg
cgccagcgcgccggccagaaggtcgagaagcgcaagggctccggcgtggccgtgctgccc
ggcaagctgaccgattgcgagagcaaggacatcagccacaacgaagtcttcctggtcgag
ggcgactccgccggcggcagcgccaagatgggccgcgacaaggaaagccaggccatcctg
ccgctgcgcggcaaggtgctcaacacctgggaagtggagcgcgaccggctgttcgccaac
accgaaatccacgacatctcggtggccgtgggcgtcgatccgcacggccccaccgattcg
cccgacatgagcggcctgcgctacggcaagatctgcatcctctcggatgccgacgtggac
ggctcgcacatccaggtgctgctgctcacgctgttcttccgccactttccgaaactcatc
gaagccggccacgtgtatgtcgcaaagccgccgctgttccgcgtcgatgcgcctgcgcgc
ggcaagaagccggcctccaaggtctatgcgctcgacgagggcgaactcacggccacgctc
gacaaattgcgtaaagatggcgtgcgcgaaggcgcctggagcatcagccgcttcaagggc
ctgggcgaaatgagcgcggaacaattgtgggaaaccacgctcaatcccgatacccgacgc
ctgatgaaggtgcaattggggcgcttcgacttcagctccacccagggcgagatcaccaag
ctcatgggcaagggcgaggcagccgcccggcgcgaactgatggaactgcgcgccgacgat
gtcgacatcgatgtttga

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