Variovorax paradoxus S110: Vapar_3485
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Entry
Vapar_3485 CDS
T00916
Name
(GenBank) Extracellular ligand-binding receptor
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vap
Variovorax paradoxus S110
Pathway
vap02010
ABC transporters
vap02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Vapar_3485
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Vapar_3485
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vap02000
]
Vapar_3485
Transporters [BR:
vap02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Vapar_3485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
DUF1611_N
DUF6422
Motif
Other DBs
NCBI-ProteinID:
ACS20102
UniProt:
C5CSZ5
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All DBs
Position
1:complement(3674139..3675335)
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AA seq
398 aa
AA seq
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MQTKLKIIALMLGAAGLASHAVQAQEKVVIGYISDLSGLYADLEGKGGATAIQMAIDDMG
GKVLGQPVEVLSVDHQNKPDIAASKAREWIDTAGATMIFAGTNSGVALATAKVAQEKKRV
FFTNGAATSALTNAQCSPYTVHYAYDTVALAKSTGGAVVDTGGKSWFFLTADYAFGHALE
ADTAKVVKAKGGSVVGTVRAPLNASDFSSFLLQAQNSKAQVLGLANAGGDFINSMKASKE
FGIDKSMKIAGLLVFLTDVKSLGLPATQGLLHTTSWYWDADDESRKWAARYEAKTKNKPT
DIQAADYSATMAYLKAVEAVKSTDADKVMAYLKKTPINDFYAKGVIRADGRMVHDMLLAE
VKKPSESKGPWDLLKIVKKVPGDQVYTTKEESTCALWK
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccaagctcaaaatcattgctctcatgctcggggccgcgggtcttgcgagccat
gccgtgcaggcgcaggagaaggtcgtcatcggctacatcagcgacctgtcgggcctgtac
gccgacctggaaggcaagggcggcgccacggccatccagatggccatcgacgacatgggc
ggcaaggtgctcggccagccggtcgaggtgctgagcgtcgaccaccagaacaagcccgac
atcgcggcctcgaaggcgcgcgagtggatcgacacggcgggcgccacgatgatcttcgcg
ggcaccaattcgggcgtggcgctggccactgccaaggtggcgcaggaaaagaagcgcgtg
ttcttcaccaacggcgcggccacctcggcgctcaccaacgcgcagtgcagcccctacacc
gtgcactacgcctacgacaccgtcgcgctcgccaagagcaccggcggcgcggtggtcgac
accggcggcaagagctggttcttcctgacggccgactatgccttcggccatgcgctcgag
gccgacaccgccaaggtcgtcaaggccaagggcggctcggtggtgggcacggtgcgggcg
ccgctcaatgcgtcggacttctcctccttcctgctgcaggcgcagaactccaaggcccag
gtgctgggcctggccaatgccggcggcgacttcatcaactcgatgaaggcctcgaaggaa
ttcggaatcgacaagtcgatgaagatcgcgggcctgctggtgttcctcaccgacgtcaag
agcctcggcctgccggccacgcagggcctgttgcacaccaccagctggtattgggacgcc
gacgacgagtcgcgcaagtgggccgcgcgctacgaagccaagaccaagaacaagccgacc
gacatccaggccgccgactactcggccaccatggcctacctcaaggccgtggaagccgtg
aagagcaccgatgccgacaaggtcatggcctacctcaagaagacgccgatcaacgacttc
tacgccaagggcgtgatccgcgccgacggccgcatggtgcacgacatgctgctggccgag
gtcaagaagccttcggaatccaagggcccctgggacctgctgaagatcgtcaagaaggtg
ccgggcgaccaggtctacacgaccaaggaagaaagcacctgcgcgctgtggaagtaa
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