Variovorax paradoxus S110: Vapar_3535
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Entry
Vapar_3535 CDS
T00916
Name
(GenBank) binding-protein-dependent transport systems inner membrane component
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
vap
Variovorax paradoxus S110
Pathway
vap02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Vapar_3535
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vap02000
]
Vapar_3535
Transporters [BR:
vap02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Vapar_3535
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
ACS20152
UniProt:
C5CTG4
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All DBs
Position
1:3731174..3732091
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AA seq
305 aa
AA seq
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MSAPTASAHAPSPSVHAVKAWWQAAPFALVFLLFFLVPLALVAMVSLWNFNEYELIPAVT
LRNYLSLFEGCSHLTDNGDLCVTLNTYLSTFKFCLLVWGITLVVGFSVAYFLAFHVRSPG
MQTALFVLCTVPFWTSNVIRMISWVPLLGRNGLVNQALMGPGVVNQPVEWLLFSNFSVVL
AFVHLYTMFMIVPIFNSMMRIDRSLLEAASDAGASGWQTLWNVVVPLSRTGILIGSIFVI
TIVMGDFVTIGVMGGQQIASIGKIIQVQTSYLQFPLAAANAVILLAVVLMIIWGLTRLVD
IRKEL
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcccccaccgccagcgcgcatgcgcccagcccgtccgtccacgccgtcaaggca
tggtggcaggcggcgccgttcgcgctggtgttcctgctgttcttcctggttccgctggcg
ctggtcgcgatggtcagcctgtggaacttcaacgagtacgagctgatccccgcggtcacg
ctgcgcaactacctgagcctgttcgagggctgttcgcatctcaccgacaacggcgacctg
tgcgtcacgctcaacacctacctgagcaccttcaagttctgcctgctggtgtggggcatc
acgctggtggtcggcttttcggtggcctacttccttgcattccacgtccgctcgccgggc
atgcagacggcgctgttcgtgctgtgcacggtgccgttctggacttccaacgtgatccgc
atgatctcgtgggtgccgctgctgggccgcaacgggctggtgaaccaggcactgatgggc
ccgggcgtggtcaatcagccggtcgagtggctgctgttctccaatttctcggtggtgctc
gccttcgtgcacctctacacgatgttcatgatcgtgccgatcttcaacagcatgatgcgc
atcgaccgctcgctgctcgaagccgcgagcgatgcgggcgcctcgggctggcagacgctc
tggaacgtggtggtgccgctgtcgcgcaccggcatcctgatcggctcgatcttcgtcatc
acgatagtgatgggcgacttcgtcaccatcggcgtgatgggcgggcagcagatcgcatcg
atcggcaagatcatccaggtacagacctcgtacctgcagtttccgctggccgcggccaac
gcggtgatcctgctggcggtggtgctgatgatcatctgggggctcacgcggctggttgat
attcgcaaggagctttag
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