Variovorax paradoxus S110: Vapar_3589
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Entry
Vapar_3589 CDS
T00916
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
vap
Variovorax paradoxus S110
Pathway
vap03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Vapar_3589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vap03400
]
Vapar_3589
DNA repair and recombination proteins [BR:
vap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Vapar_3589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
Motif
Other DBs
NCBI-ProteinID:
ACS20206
UniProt:
C5CTL8
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Position
1:3791082..3793739
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AA seq
885 aa
AA seq
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MKTTTAQPSPSTSDFSGHTPMMAQYLGLKANHPDTLLFYRMGDFYELFWADAEKAARLLD
ITLTQRGQSAGQPVVMCGVPFHAVDTYLARLIKLGESVAICEQVGEVGASKGPVERKVVR
VVTPGTLTDSELLNDKSESLLLAVHAGTRNFCGLAWLSVTGAELRLAECPADALEAWIAR
IAPSELLYSAEVTPAFEQRLKAARAATPFTLSIRPAWQFDGGLGERKLSEQMGSNSLAAW
NAESLANAHAAAAALLGYAEHTQGRALSHVQRLSVERDGDLVELPPTTRRNLELVQTLRG
EDSPTLFSLLDTCMTGMGSRLLKRWLLSPRRDRGEAQARLEAIAALQSTVLGGTAAPWRT
LREQLKNTSDVERIAARIALRQVRPRELLALRLALAKAEQLAPALPASGELLGGIIERLA
PPSGCADLLASAIKPDPSALVRDGGVIATGHDAELDELRAISENCDDFLLKLEVSERERT
GISNLRVQFNRVHGFYIEVTQSALSKVPDNYRRRQTLKNAERFITPELKAFEDKALSAQD
RALAREKWLYEQLLDALQPSVPALTQLAGAIATLDALCALAERSHTLHWRAPSFVSHPCI
EIQQGRHPVVEARLAEKSSGGFIANDTQLGPQQRMQVITGPNMGGKSTYMRQVAIIVLLA
SIGSHVPAAACRLGPIDAIHTRIGAADDLANAQSTFMLEMTEAAQILHSATAQSLVLMDE
IGRGTSTFDGLALAAGIAAQLHDRSKAFTLFATHYFELTEFPATHHCAVNMHVSATEAGR
DIVFLHEMQPGPASKSYGIQVARLAGMPAAVVNHARQALEALESQHAQTRAQVDLFAPPP
AAETPMASAVESALAALDPDAMTPREALDALYALQKLNTRERGAA
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaacgacgaccgcgcaaccctccccctccaccagcgacttctccgggcatacgccc
atgatggcgcagtacctgggcctcaaggcgaaccatccggacaccctgctgttctaccgg
atgggcgatttctacgagctgttctgggccgacgccgaaaaggccgcgcgcctgctcgac
atcacgctcacccagcgcggccagtcggccggccagcccgtggtgatgtgcggcgtgccc
ttccatgcggtcgacacctatcttgcgcggctcatcaagctgggcgaatcggtggccatc
tgcgagcaggtgggcgaagtcggcgcgagcaagggcccggtcgagcgcaaggtggtgcgg
gtggtcacgcccggcacgctgaccgattcggaactgctcaacgacaagagcgaatcgctg
ctgctcgcagtgcatgcgggcacgcgcaacttctgcggcctggcctggctcagcgtgacc
ggcgcggagctgcggctggccgaatgcccggccgatgcgctcgaagcctggatcgcgcgc
atcgcgccgagcgagctgctctacagcgccgaggtgacgccggccttcgagcagcgcctg
aaggccgcgcgcgcggccacgcccttcacgctctcgatccgccccgcgtggcagttcgac
ggcggcctgggcgagcgcaagctcagcgagcagatgggcagcaacagcctcgcggcctgg
aacgccgaatcgctcgccaacgcgcatgccgccgcggccgcgctgctgggctatgccgag
cacacgcagggccgcgcgctgtcgcatgtgcagcgcctgtcggtggagcgcgacggcgac
ctggtcgagttgccgcccaccacgcggcgcaacctcgaactggtgcagacattgcgcggc
gaagactcgcccacgctgttctcgctgctcgacacctgcatgacgggcatgggcagccgg
ctgctcaagcgctggctgctgtcgccccggcgcgaccgcggcgaggcgcaggcccggctc
gaagccattgcggcgctccagtccacggtgctgggcggcaccgccgcgccctggcgcacc
ttgcgcgaacagctcaagaacaccagcgacgtggaacgcatcgcggcgcgcatcgcgctc
aggcaggtgcgcccgcgcgaactgctcgcgctgcgcctcgcgcttgcaaaggccgagcag
ctggccccggcgcttccggcgtccggcgaactgctgggcggcatcatcgaacggctcgcg
ccgccgtcgggctgcgccgacctgctggcgagtgcgatcaagcccgacccctcggcgctg
gtgcgcgacggcggcgtgatcgccaccggccacgacgccgaactcgacgagctgcgcgcg
atcagcgagaactgcgacgattttttgctgaagctcgaagtcagcgaacgcgagcgcacc
ggcatcagcaacctgcgggtgcagttcaaccgcgtgcacggcttctacatcgaggtcacg
caaagcgcgctctccaaggtgcccgacaactaccgccgccgccagacgctgaagaatgcc
gagcgcttcatcacgcccgagctcaaggccttcgaggacaaggcgctgagcgcgcaggac
cgggcccttgcccgtgagaagtggctctacgagcaattgctcgacgcgctgcagccctcg
gtgcccgcgctcacgcagctggccggcgccattgccacgctcgatgcgctgtgcgcgctg
gccgagcgctcgcacacgctgcactggcgcgcgccgagcttcgtctcgcacccctgcatc
gagatccagcagggccgccatccggtggtggaggcgcggctggccgaaaaatcgtcgggc
ggcttcatcgccaacgacacgcagctcgggccgcagcagcgcatgcaggtgatcaccggc
cccaacatgggcggtaagtcaacctacatgcggcaggtggcgatcatcgtgctcctggct
tccatcggctcgcacgtgccggcggcggcctgccggctcgggccgatcgacgccatccac
acccgcatcggtgccgcggacgacctggccaacgcgcagtcgaccttcatgctcgagatg
accgaggccgcgcaaattttgcacagcgccaccgcccagtcgctggtgctgatggacgag
atcggccgcggcaccagcaccttcgacggcctggcgctggccgcgggcatcgcggcccag
ctgcacgaccgcagcaaggccttcacgctctttgccacccactacttcgagctgaccgaa
ttcccggccacgcaccactgcgccgtgaacatgcatgtgagcgccaccgaggcgggccgc
gacatcgtgttcctgcacgaaatgcagcccggcccggccagcaagagctacggcatccag
gtggcgcggctcgccggcatgccggccgcagtggtcaaccacgcgcggcaggcgctcgag
gcgctcgagtcgcaacacgcccagacgcgcgcgcaggtcgacctgttcgccccgcccccg
gcggccgaaacgccgatggccagcgccgtagaatccgccctggccgcgctcgatcctgat
gcgatgacgccacgggaggcgctcgacgcgctctatgccttacaaaaactgaacacgcgc
gaacgcggcgccgcgtag
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