Variovorax paradoxus S110: Vapar_3717
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Entry
Vapar_3717 CDS
T00916
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vap02000
]
Vapar_3717
Transporters [BR:
vap02000
]
Other transporters
Pores ion channels [TC:
1
]
Vapar_3717
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ACS20333
UniProt:
C5CUC0
LinkDB
All DBs
Position
1:complement(3915472..3917580)
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AA seq
702 aa
AA seq
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MIPNFRRNAIGAAVLSLASFAAMAQAQPQPALQAQPAEAAPPALPEIAVTGNPLGASELI
APTTTLSGDRLLMRSESTLGQTLDNLPGVSSSYFGPNASRPIIRGLDGDRIRILQNGGGA
PDASSLSYDHAVPMDALVTERVEVLRGPSALQYGGSAVGGVVNVIDNRIPSEPINGFGGR
ADLGFSTGNKEKNGGVVLEGGNDRFALHVDAFNRDSQDVSVPIDLECSKPGRPWLARKIC
NSANEAHGGAVGGTLFFDQGWIGASASTYRSTYGTVAEDDVTIGMKSDRQAIEGEWRPGG
FISSIHAKASHTNYRHTEYEGGEAGTTFSNLSNDLRIEARHQKIGNFEGLVGFSSESNRF
AADGAEAFAPHSRTRSNALFLYEELGTSWGRLSFGARTEKVRVRSLGYPDDPTVTRFAIG
ERTFNPHSAAVGALVNLAPQWQLTSNLAYTERAPKDYELLANGPHVATAAWEVGNPNLDK
EKSVGFDLGAQWKSSANTARVNAYVTRFRNYIGLTASGRTLDEEGQVVTDPEATDTLAEY
LYSGVRARFTGIEASGNLRLLGTDGFGRLADAATLDFEWRGDVVRAKNLDTGEPLPRIAP
FRAGATLAYGNGPWSARFGFDYNAAQRHVPSVGARETDAYTLWNASIAYRMKVQRANLTW
YARIDNITNKLAYSPTSILTTTVYPNAPLPGRSLKVGLRVTF
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgattcccaatttccgtcgcaacgccatcggcgctgccgttctttcgctggcctccttc
gcggccatggcccaggcccagcctcaacccgcgctccaggcgcagcccgccgaagcggcc
ccgccggccctgccggagatcgccgtcaccggcaatccgctgggcgcgagcgaactgatc
gcacccaccaccacgctctcgggcgacaggctcctgatgcgctccgaatcgacgctcggc
caaacgctggacaacctgcccggcgtgagcagcagctacttcggccccaatgccagccgg
ccgatcatccgcgggctggacggcgaccgcatccgcatcctgcagaacggcggcggcgcg
cccgacgcctcgtcgctgagctacgaccacgcggtgccgatggacgcgctggtcaccgaa
cgcgtcgaggtgctgcgcggcccgtcggcgctgcagtacggcggcagcgcggtgggcggc
gtggtcaacgtgatcgacaaccgcattccgagcgagccgatcaacggcttcggcggccgt
gccgacctgggcttttccaccggcaacaaggaaaagaacggcggcgtggtgctcgaaggc
ggcaacgaccgcttcgcgctgcacgtcgatgcgttcaaccgcgactcccaggatgtctcg
gtgcccatcgacctggaatgcagcaagcccggccggccctggctcgcgcgcaagatctgc
aattcggccaacgaggcgcatggcggcgcggtgggcggcacgctgttcttcgaccagggc
tggatcggcgcctcggccagcacctaccgcagcacctacggcaccgtggccgaggacgat
gtgaccatcggcatgaagtccgaccgccaggccatcgaaggcgagtggcgcccgggcggc
ttcatcagcagcatccacgccaaggccagccacaccaactaccgccacaccgagtacgaa
ggcggcgaggccggcaccaccttctcgaacctgagcaacgacctgcgcatcgaggcgcgc
caccagaagatcggcaacttcgagggcctggtcggtttcagcagcgagagcaaccgcttt
gccgcggacggcgcggaagcctttgcgccgcacagccgcacgcgctcgaatgcgctgttc
ctgtacgaggaactcggcacgtcgtggggccggctgagctttggcgcgcgcaccgagaag
gtccgcgtcaggtcgctcggctatcccgacgatccgaccgtgacgcgctttgccatcggc
gaacgcacgttcaacccgcacagcgcggccgtgggcgcgctggtcaacctggcgccgcag
tggcagctcacctcgaacctggcctacaccgagcgcgcaccgaaggactacgaactgctc
gccaacggcccgcacgtggcaacggcggcctgggaggtcggcaacccgaacctcgacaag
gaaaagtcggtcggcttcgacctcggcgcgcaatggaagtcgagtgccaacacggcccgc
gtcaacgcctacgtcacgcgctttcgcaactacatcggcctgacggcatcgggccgcacg
ctcgacgaagaaggccaggtggtgaccgaccccgaagccaccgacacgctggccgagtac
ctctacagcggcgtgcgcgcgcgcttcaccggcatcgaggcgagcggcaacctgcgcctc
ctgggcaccgacggtttcgggcggctggccgatgccgcgacgctggacttcgaatggcgc
ggcgacgtggtgcgtgccaagaacctcgacaccggcgagccgctgccgcgcatcgcgccg
ttccgcgcgggcgcgaccctggcctacggcaacggcccctggagcgcacgcttcggcttc
gactacaacgccgcgcagcgccacgtgccgagcgtgggcgcgcgcgaaaccgatgcctac
acgctctggaatgcctcgatcgcctaccgcatgaaggtgcagcgcgccaacctcacctgg
tatgcgcgcatcgacaacatcaccaacaagctggcctacagcccgacctcgatcctgacg
acgacggtgtaccccaacgcgccgctgccggggcgctcgctgaaggtcggcctgcgcgtg
accttctga
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