Variovorax paradoxus S110: Vapar_3724
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Entry
Vapar_3724 CDS
T00916
Name
(GenBank) Three-deoxy-D-manno-octulosonic-acid transferase domain protein
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00540
Lipopolysaccharide biosynthesis
vap01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Vapar_3724
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vap01005
]
Vapar_3724
Enzymes [BR:
vap01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
Vapar_3724
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
Vapar_3724
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
Vapar_3724
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
Vapar_3724
Lipopolysaccharide biosynthesis proteins [BR:
vap01005
]
Lipid A
Vapar_3724
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glycos_transf_1
Glyco_trans_1_2
Glyco_trans_1_4
PRY
Motif
Other DBs
NCBI-ProteinID:
ACS20340
UniProt:
C5CUC7
LinkDB
All DBs
Position
1:complement(3922115..3923491)
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AA seq
458 aa
AA seq
DB search
MRSLLLRLYGAFTTAVQPLVRRKLRRRAEAEPGYGVAVEERFGHYDDATTGEGQCWVHAV
SLGETRAAAILIAELRRQYPGIPILLTHGTATGREEGAKLLEPGDTQVWQPWDMPGAVQR
FLDRFQPRIGVLMETEVWPEMAAACAERRIPLVLANARLNEKSLAAAERLGWLARPAYSA
LAAVWAQTEADAHRLVSLGAKVAGIYGNLKFDASPDARQLAAAATLRERLPKPMVVLASS
RDGEERMLLDVLRRFGATAPVPPEQGAIRSIAKRVHDVQWMIVPRHPQRFDEVAALIEAE
GFAVARRSAAGEPSDAEIWLGDSLGEMALYYGLADVALLGGSFEPLGGQNLIEPAACGCP
VVMGPSTFNFAEAAQLSLAAGASLRVENMEQAVTAALKLVENPERRAAMAEAALAFSSSN
RGAAERTAAAVLAIAQAADPVATEAAPLEDARAEPTLE
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
gtgcgttcgctgctgctgcgcctctacggcgccttcaccaccgccgtgcaaccgctggtt
cgccgcaagctgcggcgcagggccgaggccgagcccggctacggcgtggccgtggaggag
cgcttcggccactacgacgatgcaaccaccggcgagggccagtgctgggtgcatgcagtc
tcgctcggtgaaacgcgcgcggccgccatcctgatcgccgaactgcgcaggcagtacccg
ggcataccgatcctgctcacgcacggcaccgccaccggccgcgaagagggcgccaagctg
cttgaacccggcgacacgcaggtctggcagccctgggacatgccgggcgcggtgcagcgc
tttctcgaccgcttccagccacgcatcggcgtgctgatggaaaccgaggtctggcccgag
atggctgccgcctgcgccgagcgccgcatccccctggtgctggccaatgcgcggctcaac
gagaaatcgctggccgcggccgaacgccttggctggctcgcgcggcccgcctattcggcg
ctggccgccgtgtgggcgcagaccgaggccgacgcgcaccggctggtgtcgctgggcgcc
aaggtggccggcatctacggcaacctcaagttcgacgcttcgcccgatgcgcgccagctg
gccgcggccgcgacgctgcgcgagcggctgcccaagccgatggtggtgctcgcgagttcg
cgcgacggcgaggagcgcatgctgctcgacgtgctcaggcgcttcggcgccacggcgccc
gtgccgcccgagcagggcgccatccgctccattgccaagcgcgtgcacgacgtgcagtgg
atgatcgtgccgcgccacccgcagcgcttcgacgaagtggctgcgctgatcgaagccgag
ggctttgccgtggcgcgccgcagcgccgcgggcgagccgtccgatgccgagatctggctg
ggcgattcgctcggcgaaatggcactgtactacggcctggccgacgtcgcgctgctcggc
ggaagcttcgagccgctgggcgggcagaacctgatcgagccggccgcctgcggctgcccg
gtggtcatggggccctcgaccttcaactttgccgaagcggcgcagctttcgctggcggcc
ggtgcctcgctgcgcgtcgagaacatggagcaggcggtcaccgcggcgctcaagctggtc
gagaaccccgagcggcgcgccgccatggccgaggccgcgctggctttctcgtcatcgaac
cgcggcgccgctgaacgcaccgcagccgcggtgctggccatcgcgcaggccgccgacccg
gtggcgaccgaagccgcgccgctcgaggatgcgcgggcggaacccacgctcgagtag
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