KEGG   Variovorax paradoxus S110: Vapar_3778
Entry
Vapar_3778        CDS       T00916                                 
Name
(GenBank) type VI secretion system Vgr family protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
vap  Variovorax paradoxus S110
Pathway
vap03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vap00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Vapar_3778
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vap02044]
    Vapar_3778
Secretion system [BR:vap02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   Vapar_3778
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Phage_base_V DUF6484 Phage_Mu_Gp45
Other DBs
NCBI-ProteinID: ACS20394
UniProt: C5CUV8
LinkDB
Position
1:3992966..3995356
AA seq 796 aa
MPRVVRAHTPLGEDQLMFRSMHGTEGLSQLFEFEVELLSPSMSIDMKAVLGKPLALEIQT
AGAPRFLNGQIVRFTMIGKEDGASRYVVYRATVRPWLWYLTRTSDCKIFQNKSVVDILEE
VFADYGFAFEKKLSASYRQWEYCVQYQETDFAFVSRLMEHEGIYYYFTHEKGQHTLVLAD
DIGAHETLPGYAKIGYLAADRGADPRQEVIDQWQVTEEIRPGSYVVDDFDFKKPRADLMN
MRSQPRGNEHGQYEMYEWLGGFSEAEQGEHYSRIRLEEAQAQAERDIGHTNVRGMAPGYR
FTMQNCPRQEDNREYLVVSVSYALREGGYASGGAEGHYSFDFAVQPSAYVFRAPRVTPLP
RTNGPQTATVVGKAGQEFWVDQYGRVKVQFRWDRYGKSDENSSCWVRVSSAWAGSNYGAV
NHPRKGQEVVVDFIGGHPDRPIIIGRVYNADQMPPLELPAQVTVSGFVSRSQDGSPANAN
EFILDDAPGCELVRIHAEKDFEIDVENDLRIHVENDETETVDGHRITHILKTDTLTVDQT
RDTLVKQKDTAEYRNGSKLTVSGALTEHFFDNRIETTTKLGSKETVLSGLSEVTVNGGLR
HETFDKGLLVDVKLGMDEEIHTGNSILKTLDGNRQESYQTGWQRTIVSGGGKDNIKDGLT
ETIETGDHHSTVSAGDYNGKAQKVTIEATAGDVEIKASGDFTFEGNHVKRVNRVLLWDWS
PTAVTATGLSSATYGVNNSNAGFTFTTNIKKMDATAQIMNMYAHQANFGAVSFSNVVASE
HTGGFWGALKGFVLFG
NT seq 2391 nt   +upstreamnt  +downstreamnt
atgccccgagtcgtacgcgcacacacgccgctgggcgaagaccagctcatgttccgttcg
atgcacggaaccgaaggactgtcgcagctgttcgagttcgaggtcgaactgctgagtccc
agcatgtcgatcgacatgaaggccgtgctgggcaagccgctggcgctggagatacagact
gcgggcgcgccgcgcttcctgaacgggcagatcgtccgcttcacgatgatcggcaaggag
gatggcgcctcgcgctacgtggtctaccgcgccacggtgcggccatggctctggtatctc
acgcgcaccagcgactgcaagatattccagaacaagtcggtggtcgacatcctcgaagag
gtgtttgcggactacggctttgccttcgagaagaagctcagcgcgagctacaggcagtgg
gagtactgcgtccagtaccaggaaaccgacttcgccttcgtgagccgcctcatggagcac
gaaggcatctactactacttcacgcatgagaagggccagcacacgctggtgctggccgac
gacatcggcgcgcacgagaccctgcccggctacgcgaagatcggctacctggccgccgac
cgcggcgccgacccgcggcaggaagtgatcgaccagtggcaggtcaccgaggagatccgc
cccggcagctacgtggtggacgacttcgacttcaagaagccccgcgccgacctgatgaac
atgcgcagccagccgcgcggcaacgagcacggccagtacgagatgtacgaatggctcggc
ggcttcagcgaggcggaacagggcgagcactactcgcgcatccgcctggaggaagcgcag
gcgcaggccgagcgcgacatcggccacaccaacgtgcgcggcatggcgcccggctaccgc
ttcaccatgcagaactgcccgcggcaggaagacaaccgcgaatacctcgtggtgtcggtg
tcgtatgcgctgcgcgagggcggctacgccagcggcggcgccgaaggccactacagcttc
gactttgccgtgcagcccagcgcctatgtctttcgcgcgccgcgcgtcacgccgctgccg
cgcaccaacgggccgcagacggccaccgtggtcggcaaggcgggccaggaattctgggtc
gaccagtacggccgcgtaaaggtgcagttccgctgggaccgctacggcaagagcgacgag
aacagctcctgctgggtgcgtgtctccagcgcatgggccggctccaactacggcgcggtc
aaccatccgcgcaagggacaggaggtggtggtcgacttcatcggcggccatcccgaccgg
cccatcatcatcggccgggtctacaacgccgaccagatgcccccgctcgaactgccggcg
caggtgaccgtgagcggtttcgtgagccgcagccaggacggctcgccggccaacgcgaac
gaattcatcctggacgacgcgccgggctgcgagctggtgcgcatccatgccgagaaggac
ttcgagatcgatgtcgagaacgacctgcggatccacgtcgagaacgacgagacagaaacc
gtcgacggccaccgcatcacccacatcctgaagaccgacacgctcaccgtcgaccagacc
cgcgacaccctcgtcaagcagaaggacaccgccgaataccgcaacggctcgaagctcacc
gtctcgggcgcgctcaccgagcacttcttcgacaaccgcatcgagaccaccaccaagctc
ggctcgaaggagacggtgctcagcggcctgtcggaggtcacggtcaacggcggcctgcgc
cacgagaccttcgacaaggggctgctggtcgacgtgaagctcggcatggacgaggagatc
cacaccggcaactccatactgaagacgctcgacggcaaccggcaggaaagctaccagacc
ggttggcagcgaaccatcgtgagcggcggcggcaaggacaacatcaaggacggcctcacc
gaaaccatcgagacaggcgaccaccactcgaccgtctcggccggcgactacaacggcaag
gcccagaaggtgaccatcgaagccacggcgggggacgtcgagatcaaggccagcggcgac
ttcaccttcgagggcaaccacgtcaagcgcgtgaaccgcgtgctgctgtgggactggtcg
ccgacggcggtgacggccaccggcctgtcgagcgcgacctacggcgtgaacaacagcaac
gccggcttcacgttcacgaccaacatcaagaagatggatgccaccgcgcagatcatgaac
atgtacgcgcaccaggccaacttcggcgcggtgagcttctcgaacgtggtggcctcggag
cacaccggcggcttctggggcgcgctcaagggcttcgtgctcttcggctga

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