Variovorax paradoxus S110: Vapar_3848
Help
Entry
Vapar_3848 CDS
T00916
Name
(GenBank) transcriptional regulator, GntR family
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vap03000
]
Vapar_3848
Transcription factors [BR:
vap03000
]
Prokaryotic type
Helix-turn-helix
GntR family
Vapar_3848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GntR
Aminotran_1_2
HTH_Crp_2
HTH_IclR
HTH_24
HTH_36
MarR
HTH_41
Motif
Other DBs
NCBI-ProteinID:
ACS20462
UniProt:
C5CV26
LinkDB
All DBs
Position
1:complement(4070439..4071959)
Genome browser
AA seq
506 aa
AA seq
DB search
MANPRATQWAQLFALPDQPALPLQARLRAAVVQAILEDHLSPGASMPSSRELAALLGLSR
NTVTSAYLQLIDEGFLEARPRSGVFVAHNARPLSAAHAEPLVGRSGQASQPPDWSGRVLR
SLEGKPTLAKPDRWRDYPFPFVYGNYDPQLFPTEDFRECCARSLARSQLPHWTPDFETDD
VPDLIEQIRTRLLPKRGVFALKEEILVTLGAQHAYYLLADALFDEHTRVGLEEPGHPHAR
NSFSMRNPKWVEVAVDEEGLVVDALPAADYLFVTPSHQSPTTATLSLERRQWLLRKAELQ
DFVIIEDDYEAENLYEGTPMPALKSLDKTGRVIYVGSVSKSLSPALRLGFIVAPRALIKE
LRGIRHAMVRHPSAFLQHAYALFLSLGHHESHARRVNHAMQERLALAAKALREHLPEFEF
TLPQGGASIWVRAPAWVDAGELSLMARSHGVLIEAGDVFFAKPPYPCPFFRLRLSSIAAS
QIPLGIQALGMAVGELALARGEVRAH
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggccaaccccagagccactcaatgggcgcagctcttcgcgctgcccgaccagcccgcc
ttgccgctgcaggcccgtctgcgcgccgccgtggtgcaggccatcctcgaggaccacctg
agccccggtgcctcgatgccctcgtcgcgcgagcttgccgctctgctcgggctgagccgc
aacaccgtcacttcggcctacctgcaattgatcgacgaaggcttcctggaagcgcgtccg
cgcagcggcgtgttcgtggcgcacaacgcgcggccgctgtccgctgcgcatgcggagccg
ctggtgggccgcagcggacaggccagccagccgcccgactggtcggggcgcgtgctgcgc
tcgctggagggcaagcccacgctcgccaagcccgaccgctggcgcgactatccgttcccg
tttgtctacggcaactacgacccgcagctttttccgaccgaggattttcgcgagtgctgc
gcgcgcagcctggcgcgctcgcagctgccgcactggacgcccgacttcgagaccgacgac
gtgcccgacctgatcgagcagatccgcacgcgcttgctgcccaagcgcggcgtgttcgcg
ctgaaggaagaaatcctggtgacgctcggcgcgcagcatgcgtactacctcttggccgat
gcgctgttcgacgagcacacccgcgtcggcctggaagagcccggccatccgcatgcgcgc
aacagcttctcgatgcgcaaccccaagtgggtcgaggtggcggtggacgaggagggcctg
gtggtcgatgcgctgcccgcggccgactatctcttcgtgaccccttcgcaccagagcccg
accaccgccacgctgagcctggagcgcaggcagtggctgctgcgcaaggccgagctgcag
gacttcgtgatcatcgaggacgactacgaggccgagaacctgtacgaaggcacgccgatg
ccggcgctcaagagcctggacaagaccgggcgcgtgatctacgtgggctcggtgtccaag
agcctttcgcccgcgctgcggctcggcttcatcgtggcgccgcgcgcgctgatcaaggaa
ctgcgcggcatacggcatgcgatggtccggcatccgagcgcctttctgcagcatgcgtac
gcgctgttcctgtcgctcgggcaccacgagtcgcatgcgcggcgcgtgaaccatgcgatg
caggagcggcttgcgcttgcggccaaggcgctgcgcgagcatctgcccgagttcgagttc
acgctgccgcagggcggggcgtcgatctgggtgcgggcgccggcgtgggttgacgcgggc
gagctgtcgctgatggcgcgcagccatggggtgctgatcgaggcgggggatgtgttcttt
gcgaagccgccttatccgtgtccgttttttcggttgaggttgtcgtctattgcggcttcg
cagattcctttggggattcaggccttggggatggctgttggggagttggcgttggctcgg
ggggaggtgagggcgcattga
DBGET
integrated database retrieval system
