Variovorax paradoxus S110: Vapar_3853
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Entry
Vapar_3853 CDS
T00916
Name
(GenBank) outer membrane autotransporter barrel domain protein
Organism
vap
Variovorax paradoxus S110
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
AC_1
ESPR
Pertactin
Motif
Other DBs
NCBI-ProteinID:
ACS20467
UniProt:
C5CV31
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All DBs
Position
1:4075156..4078323
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AA seq
1055 aa
AA seq
DB search
MNKTFRTLWNPALGAWVAAPEIARGHVRTTGLHAVAMAVLCLGAGPTLAQGGAGGQPVDS
ALHAGTGGSNGSGGAGGLNDTSVAAHGGDGGSSTDAAVTAGSAADVGSFSGATAGAGGAA
GSSSTVVSPGVLQGASGGAGQSQTGDFSNGNGYGGGGGGGYYGLLLGSSTFASSGSYTGG
SGGAGGNGYWAAGGGGAGGYGSVLIGPLSNYDAFGSSVGGTGGNGGNAYSQGGGGGSGGG
GFFISAATPGLGFGNSGTLAGGAGGAGGSELLPARSNAAGGGGGAGGAGATLAGSTLDVT
NTGQITGGAGGAGGAGGGGAGGTGAPGGGGDGGVGLLSTGSGAAIANSGTIAGGAGGTGG
ANSNGGASGAPGAGGAGIAGANLNISNSGSISGGLGGDGATRAPAVAFTGGSNSLTVNTG
SSMLGAIAIGSGASASVIAGADGLSLDNALLLGGTGTIDTNGHGLGWSGPISGAGDLVKV
GAGTLTLSGTNTNTGATNVAAGTLRAGAADTLSSASAFTVNAGATLDLAGHSQTIASMAN
SGIVSLLSGTPGATLTVHGPWVGNDGTLRLGTALGNSASLSDRLILCGTTAIASGTTNIQ
VTNLGGLGALTIGNGIEVVTAMNGATTTAQTTRDAFRLAGGHVDAGAYEYRLHAADATGA
GENWYLRSGVIVVPPPPPPPPPPPPPPAPPAPPAPPAPPAPPAPPAPPAPAPGDGGTPRS
SDGGFPPGGVTVPTYRAEVPLYAALPEQFRQSNLAMVGNLHQRVGDDGTAGLATATPEQG
YRQGWARIISMDRTIGQAGTVSPTSKGRLTGFQAGNDLWADPNWRVGIYVGQLDGDMRVN
GFARGVQGYGVGSSDLRSQYLGAYATWKNDSGLYVDGVLQAGRHRYTAATTLGSAGSGKG
HSLLASIEVGQGFHISPEWIVEPQLQLVHQHVSLDDAGIIGAVVQQHSHSGWLVRAGVRV
KGEMTTSAGPLQPYARLNLYRSSSGTDVTRFIGPAAYTDIATRTGGTSTELAAGATLQLT
QSMSLYGEVGKFWASGGDARMKSGVNASVGLKIRW
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaccttccgaaccctctggaatccggcgctcggcgcatgggtggccgcgccg
gaaatcgcacgcggccatgtgcgcacgaccggcctgcatgccgttgccatggcggtgctg
tgcctgggtgccggcccgaccctggcccagggcggcgcaggcggccagccggtggacagc
gcgctgcacgccggcaccggcggcagcaacggcagcggcggcgcgggcggactcaatgac
acctccgttgcagcgcatggcggcgacggcggatcgtcgaccgacgccgcggtcacggcg
ggctccgccgccgacgtcgggagtttcagcggcgccaccgcgggcgcgggcggtgcggcg
ggcagctccagcaccgtcgtctcccccggcgtgctgcagggagccagcggcggcgcgggc
caatcgcagaccggcgatttcagcaacggcaatggatacggcggcgggggcggcggcggc
tactacggccttttgctgggctccagcaccttcgcgtcgtccggcagctacaccggcggc
agcggaggcgcgggcggcaacggctactgggcggccggcggcggcggcgccggcggctac
ggctccgtgctgatcggcccgctcagcaactacgacgccttcggctcttccgtgggcggc
accggcggcaacggtggcaatgcttattcgcagggcggcggcggcggcagtggcggcggc
ggattcttcatcagcgcggcaacgccgggcctcggcttcggcaacagcggcacgctcgcg
ggcggtgccggcggcgcgggcgggtccgaacttctgccggcccgaagcaatgccgcgggc
ggcggcggcggcgcgggcggcgccggtgccacgctggccggcagcaccctcgacgtgacc
aacaccggccagatcaccggcggcgccggcggcgctggcggtgcgggcggcggcggcgcg
ggcggcaccggtgcgcccggcggcggcggcgacggcggcgtgggccttctctccaccggc
agcggcgcggcgattgccaacagcggcaccatcgccggcggcgcgggcggcaccggcggg
gccaacagcaacggcggcgcaagcggcgcgcccggcgccggcggcgccggcatcgcgggc
gccaacctgaacatcagcaacagcggcagcatttcaggcggccttggcggcgacggcgcc
acgcgcgcaccggccgtggcgttcaccggcggcagcaacagcctgaccgtgaacaccggc
tcgtcgatgctgggcgccattgccatcggaagcggtgccagcgccagcgtgatcgccggc
gccgacggcctgagcctggacaacgcactgctgctgggcggcacgggcaccatcgacacc
aacggccacggcctgggctggtcgggcccgatctcgggcgccggcgacctggtgaaggtc
ggcgcgggcacgctcaccctgagcggcaccaacacgaacaccggcgccaccaacgtcgcg
gccggcaccctgcgcgccggtgcggccgacacgctcagcagcgcgagcgccttcaccgtc
aacgcgggcgccacgctcgacctggcgggccatagccagacgatcgcatcgatggccaac
agcggcatcgtctccctgctgagcggcacgcccggtgccaccctcacggtgcacggcccc
tgggtgggcaacgacggcacgctgcgcctgggcacggcgctgggcaacagcgccagcctg
agcgaccggctgatcctctgcggcaccaccgccattgccagcggcaccaccaacatacag
gtcaccaacctgggcggcctgggcgcgctgaccatcggcaacggcatcgaagtggtgacc
gcgatgaacggcgccaccaccacggcgcagaccacccgcgatgccttccgcctggcaggc
ggccacgtcgacgccggcgcctacgagtaccggctgcacgccgccgacgcgaccggcgcg
ggcgagaactggtacctgcgctccggcgtcatcgtcgtgccgccgcctcctcccccaccg
cctccgccgcctccgccacctgcaccaccggcgccgcccgcgccaccggcaccacctgca
ccacctgcaccaccagcaccccctgcgcctgcgccgggcgacggcggcaccccgcgaagc
agcgacggcggcttcccgcctgggggcgtgacggtgcccacctaccgtgccgaagtcccg
ctgtatgcggcgctgcccgagcagttccgccagtccaacctggccatggtgggcaacctc
caccagcgcgtgggcgacgacggcacggccggccttgccacggccacgcccgagcagggc
taccgccagggctgggcccgcatcatcagcatggaccgcaccatcggccaggccggcacc
gtgagccccaccagcaaggggcgcctcacaggcttccaggccggcaacgacctgtgggcc
gatcccaactggcgcgtcggcatctatgtcggccagctcgacggcgacatgcgcgtgaac
ggctttgcccgcggcgtgcagggctatggggtcggctcgagcgacctgcgcagccagtac
ctgggcgcctatgccacctggaagaacgacagcggcctgtacgtggacggcgtgctgcag
gccgggcgccaccgctacaccgcggccaccacgctgggttcggccggctcgggcaagggc
cacagcctgctggcctccatcgaggtgggccagggcttccacatctcgccggagtggatc
gtcgagccgcaattgcagctggtgcaccagcacgtgagcctggacgacgccggcatcatc
ggcgcggtggtgcagcagcacagccacagcggctggctggtgcgcgccggcgtgcgggtc
aagggcgagatgaccaccagcgccggcccgctgcagccctatgcgcggctgaacctctac
cgcagcagcagcggcacggacgtcacgcgcttcatcggccccgcggcctataccgacatt
gccacccgcaccggcggcacgagcaccgaactggcggccggcgccacgctgcagctcacg
cagagcatgagcctgtatggcgaggtcggcaagttctgggcctcgggcggcgacgcgcgc
atgaagagcggcgtgaatgccagcgtgggcctgaagatccgctggtga
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