Variovorax paradoxus S110: Vapar_3874
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Entry
Vapar_3874 CDS
T00916
Name
(GenBank) substrate-binding region of ABC-type glycine betaine transport system
KO
K15553
sulfonate transport system substrate-binding protein
Organism
vap
Variovorax paradoxus S110
Pathway
vap00920
Sulfur metabolism
vap02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
Vapar_3874
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Vapar_3874
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vap02000
]
Vapar_3874
Transporters [BR:
vap02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Sulfonate transporter
Vapar_3874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMT1
Phosphonate-bd
NMT1_2
OpuAC
SBP_bac_5
NMT1_3
Motif
Other DBs
NCBI-ProteinID:
ACS20488
UniProt:
C5CV52
LinkDB
All DBs
Position
1:4103872..4104852
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AA seq
326 aa
AA seq
DB search
MTDLLFSKASRRHWLKQGAALSFAATAPLGAWAQAQTTLVLGDQAGGLRALFEASKALEG
VPFAYRWANFQGAAPLFEAQRSAAVDTAVAGDLPVLAAAVGRTPLKIVATRVGKADALGI
VVQPDSPLRQVADLRGKTVIVSSARGSISQYQLYGALEEAGVRRDEVTVKFVLPTDAAAA
FASKQIDAWAVFDPYYTIALQQGGRILRDGRGINTALGFITASEPSLADPAKRAAIVQFL
DRLARAGEWALATPEAYAQAYSQLTRLPIESARIITARASVTGRPVSEADIAALQTVADR
SARDGILPLRVDVRAITDAQLWKRPA
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacctgctgttctccaaggcctcgcgccgccattggctcaagcagggcgcggcg
ctctcgttcgcagccaccgcgccgctgggcgcatgggcgcaagcgcaaaccacgctggtg
ctcggcgaccaggccggcggcctgcgcgcgctgttcgaggcctcgaaggcgctcgagggc
gtgcccttcgcctaccgctgggccaacttccagggcgcggcgccgctgttcgaggcgcag
cgcagcgcggccgtcgacaccgcggtggccggcgacctgccggtgctggcggcggcggtc
ggccggacgccgctgaagatcgtcgccacgcgcgtcggcaaggccgatgcgctgggcatc
gtggtgcagcccgattcgccgttgcgccaggtggccgacctgcgcggcaagacggtgatc
gtgtcgtccgcgcgcggcagcatctcgcaataccagctctacggcgcgctcgaggaagcc
ggcgtgcggcgcgacgaggtcacggtgaagttcgtgctgccgaccgatgcggccgcggcc
tttgcctcgaagcagatcgatgcctgggctgtgttcgatccctactacacgatcgcgctg
cagcagggcgggcgcatcctgcgcgatgggcgcggcatcaacacggcgctgggcttcatc
accgcgagcgagccgtcgctcgccgaccccgccaagcgcgccgccatcgtgcagtttctg
gaccggctggcgcgcgcgggcgaatgggcgctggccacccccgaggcctatgcgcaggcc
tacagccagctcacgcgcctgccgatcgaatcggcccgcatcatcacggcgcgcgcctcg
gtcacgggccggccagtgtccgaagccgacattgccgcgctgcagacggtggccgaccgc
tcggcgcgcgacggcatcctgccgctgcgcgttgacgtgcgcgccatcaccgatgcgcag
ctgtggaagcgtcccgcgtga
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