Variovorax paradoxus S110: Vapar_3915
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Entry
Vapar_3915 CDS
T00916
Name
(GenBank) TRAP dicarboxylate transporter, DctM subunit
KO
K11690
TRAP-type transport system large permease protein
Organism
vap
Variovorax paradoxus S110
Pathway
vap02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Vapar_3915
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vap02000
]
Vapar_3915
Transporters [BR:
vap02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Vapar_3915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
Motif
Other DBs
NCBI-ProteinID:
ACS20529
UniProt:
C5CVM6
LinkDB
All DBs
Position
1:4153047..4154348
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AA seq
433 aa
AA seq
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MSPDAVAILGFVVLFALMLLRVPVGMAMGLVGVAGYSYLVGPGPALKLVGQTSMRTVTDY
TFGVIPMFMLMGALVSVSGVSRELFKAANSMIGHMRGGLGVATVVACGGFAAICGSSVAT
AATFSAVAYPEMRRFNYPQSFSTGVIAAGGTLGAILPPSTVLAVYAILTQQDIGKLFMAG
IVPGILAMAMYVLTIAIIVKARPGWLPGGEVKPWSERLNDLKNVWAPLVLFVFVIGGLYG
GFFTPTEAGGVGASGAFILGLLRRKLDGPKIREALLSATRTAAAVFTVLIGALLFGYFLT
ITQSPQKLTEFLTGLGIGRYGVLALIMLMYLVLGCLMDAMAMIILTVPIIFPVIVHLGFD
PIWFGVIIVMTVELGLIHPPVGMNVFVIKSVVKDVSFTTIFKGVLPFIVTDIVRLVILIA
FPIIALWLPTRMN
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgagccccgatgcagttgcgattcttggcttcgtggtcctcttcgcgctgatgctcttg
cgggtgccggtgggcatggcgatgggcctcgtgggcgtggcgggctacagctacctcgtg
ggccccgggcccgcgctcaagctggtcggccagacctccatgcgcaccgtgaccgactac
accttcggcgtgatcccgatgttcatgctgatgggcgcgctggtgtcggtgtcgggcgtg
agccgcgaactcttcaaggccgccaactcgatgatcggccacatgcgcggcgggctcggc
gtggccaccgtggtggcctgcggcggcttcgcggcgatctgcggctcctcggtggccacg
gccgccaccttctcggcggtggcctatccggagatgcggcgcttcaactacccgcagtcg
ttctccaccggcgtgatcgccgcgggcggcacgctgggcgccattcttccgccttcgacg
gtgctcgcggtctacgccatcctcacgcagcaggacatcggcaagctcttcatggccggc
atcgtgcccggcatcctggccatggcgatgtacgtgctgaccatcgcgatcatcgtgaag
gcgcggcccggctggctgcccggcggcgaggtcaagccgtggtcggaacgcctcaatgac
ctgaagaacgtgtgggcgccgctggtgctgttcgtgttcgtgatcggcgggctctacggc
ggcttcttcacgcccaccgaggccggcggcgtgggcgcgagcggcgccttcatcctcggg
ctgctgcggcgcaagctcgacggcccgaagatccgcgaggcgctgctgtcggccacgcgc
acggcggcggcggtgttcacggtgctgatcggcgcgctgctctttggctacttcctcacc
atcacgcagagcccgcagaagctcacggaattcctcaccggcctgggcatcggccgctac
ggcgtgcttgcactcatcatgctgatgtacctggtgctcggctgcctgatggacgcgatg
gccatgatcatcctcacggtgccgatcatctttccggtgatcgtgcacctgggcttcgat
ccgatctggttcggcgtgatcatcgtgatgacggtggaactggggctgatccatccgccg
gtggggatgaacgtgttcgtgatcaagagcgtggtgaaggacgtgagcttcaccaccatc
ttcaagggcgtgctgccgttcatcgtgacggacatcgtgcgcctggtgatcctgatcgcg
tttcccatcatcgccttgtggctgccgacgagaatgaactga
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