Variovorax paradoxus S110: Vapar_3947
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Entry
Vapar_3947 CDS
T00916
Name
(GenBank) glycosyl transferase family 2
KO
K11936
poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00543
Exopolysaccharide biosynthesis
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00543 Exopolysaccharide biosynthesis
Vapar_3947
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
vap01003
]
Vapar_3947
Glycosyltransferases [BR:
vap01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
Vapar_3947
BRITE hierarchy
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Ortholog
Paralog
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GFIT
Motif
Pfam:
Glycos_transf_2
Glyco_tranf_2_3
Glyco_trans_2_3
Chitin_synth_2
Glyco_transf_21
Glyco_tranf_2_2
Glyco_tranf_2_4
Motif
Other DBs
NCBI-ProteinID:
ACS20561
UniProt:
C5CVQ8
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Position
1:complement(4188840..4190177)
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AA seq
445 aa
AA seq
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MNEEGQKALQPMIYLPVSGKFVIALIGASAWMWFSIWAAGPWLADLTDRVGMALAIFLVY
GIAVVPGFMNAFLAISLLLDRRPAHPALAVYPPISILIAAYNEEASIDETLVSIDRQNYP
GELQVIVINDGSADGTSLVVQRARERYPWLTFLDLEKNGGKARALNIGFKEVAHDLVITV
DADSFLYRGALTSIVERYRADPPHTRAVAGKILVRNSRLNWITRCQEWDYFHGIAAIKRV
QSLFQGTLVAQGAFSIYDRAALVEVGGWPECVGEDIVLTWALLKAGYRVGHCEDACLFTN
VPTTVKQLVKQRQRWARGMAEAFIKHPGILVKPRLSTFFIYWNLLFPWLDLACTIGFIPG
IILAFFGHYWIVGIMTLALIPATFALSLLMFRIERRMFRKTGLVVRKNVQGFFVYVLLYS
LILQPASVLGYLDELFRKPKAWGTK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagaaggccagaaggcgctgcagccaatgatttacctgcccgtatcgggcaag
tttgtcattgcgttgattggcgccagcgcctggatgtggttctcgatatgggccgcgggc
ccctggctggccgacctgacggatcgggtggggatggccctggccattttcctggtgtat
ggcattgccgttgttccgggcttcatgaatgcgttcctggccatcagcctgctgctggac
aggaggccggcgcatcccgcgttggccgtctatcccccgatctccatcctgattgccgcc
tacaacgaggaagcgtccatcgacgagacgctggtcagcatcgatcggcagaactacccg
ggcgaactgcaggtgatcgtgatcaacgacgggtccgcggacggcacctcgcttgtcgtc
cagcgtgcccgggaacggtatccgtggctgaccttcctggacctggaaaagaatggcggc
aaggcgcgcgcgctgaacatcgggttcaaggaggtggcgcacgacctggtcatcaccgtc
gatgccgactccttcctctaccgtggcgctttgaccagcatcgtcgagcgctatcgcgcc
gacccgccccatacgcgggccgtcgcaggaaagatcctggtccgcaactcgcggctgaac
tggatcacccgctgccaggaatgggactacttccatggcattgccgccatcaagcgcgtg
cagtcgctgttccagggcaccctggttgcgcagggtgcgttttcgatctacgaccgggcc
gcgctggtcgaggttggcggatggcccgaatgcgtgggcgaggacatcgtgctcacctgg
gccctgctgaaggccggctaccgggtgggccactgcgaggacgcgtgcctgttcaccaat
gtgcccaccaccgtcaagcaattggtcaagcagcgccagcgatgggcgcggggcatggcg
gaagccttcatcaagcacccggggatcctggtcaagccgcgcctgtcgaccttcttcatc
tattggaacctgctgtttccgtggctggacctggcatgcaccatcggcttcattcccgga
atcatcctcgcgttcttcggccactactggatcgtcgggatcatgaccctcgcgttgatc
ccggccaccttcgcattgagcctgctcatgttccggatcgaacgccggatgttcaggaag
accggcctcgtggtgcgaaagaacgtccagggcttctttgtctacgtgctgctgtacagc
ctgatcctgcagcctgccagcgtgctcggctacctcgatgaactgttcaggaagcccaag
gcctggggaaccaaatga
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