Variovorax paradoxus S110: Vapar_3954
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Entry
Vapar_3954 CDS
T00916
Name
(GenBank) glyoxylate carboligase
KO
K01608
tartronate-semialdehyde synthase [EC:
4.1.1.47
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00630
Glyoxylate and dicarboxylate metabolism
vap01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Vapar_3954
Enzymes [BR:
vap01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.47 tartronate-semialdehyde synthase
Vapar_3954
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SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TPP_enzyme_M
TPP_enzyme_C
TPP_enzyme_N
Motif
Other DBs
NCBI-ProteinID:
ACS20568
UniProt:
C5CVR5
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All DBs
Position
1:4196848..4198641
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AA seq
597 aa
AA seq
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MAKMKAVQAAVLVMEKEGVTQAFGVPGAAINPMYSALRQRGTISHILARHVEGASHMAEG
YTRAVAGNIGVCIGTSGPAGTDMITGLYSAWADSIPILCITGQAPRARLYKEDFQAVDIE
SISKPVTKWSVTVREPGQVPQVFQQAFHLMRSGRPGPVLVDLPFDVQMAEIEFDIDAYQP
LTPYKPAATRAQIEKAIGMLQAAERPLIVAGGGIINADAADLLVRFAETTGVPVIPTLMG
WGAIPDDHPLMAGMCGLQTSHRYGNATMLASDFVLGIGNRWANRHTGSVDVYTKGRTFVH
VDIEPTQIGRVFTPDFGIVSDAKAALEQFVAVAEEMKAAGKLRDRREWARSCIERKKTML
RKTNFDEVPMKPQRVYQCMNNNFSNDTCYVSTIGLSQIAAAQFLHVYNPRHWINCGQAGP
LGWTIPAALGVRAADPSRKIVALSGDYDFQFMIEELAVGAQFKLPYIHIVVNNSYLGLIR
QAQRGFEMDYCVQLAFDNINAGPDAGIESSYGVDHLKVVEGLGCKAIRVNRQEEIAPAIQ
RAEALMAEFSVPVVIEVMLERVTNIAMGTEIDNITEFEPLAEHPADAPTAVAAEMLD
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaatgaaagcggtccaggccgccgtgctggtgatggaaaaggaaggcgtgacg
caggccttcggcgtgcccggcgcggccatcaatccgatgtattccgcgctgcgccagcgc
ggcaccatctcgcacatcctcgcgcgccacgtcgaaggcgcctcgcacatggccgagggc
tacacgcgtgccgtggccggcaacatcggcgtgtgcatcggcacctcgggccccgcgggc
accgacatgatcacgggcctgtactcggcctgggccgattcgattcccattctctgcatc
accggccaggcgccgcgcgcgcggctctacaaggaagacttccaggcggtggacatcgag
tcgatctccaagccggtcaccaagtggtcggtcacggtgcgcgagcccggccaggtgccg
caggtgttccagcaggccttccacctgatgcgctcgggccgcccgggcccggtgctggtc
gacctgcccttcgacgtgcagatggccgagatcgagttcgacatcgacgcctaccagccg
ctcaccccctacaagcccgccgccacgcgcgcccagatcgagaaggccatcggcatgctc
caggccgccgagcgcccgctgatcgtagccggcggcggcatcatcaacgccgatgcggcc
gacctgctggtgcgctttgccgagaccaccggcgtgccggtgattcccacgctgatgggc
tggggcgcaatccctgacgaccatccgctgatggccggcatgtgcggcctgcagaccagc
caccgctacggcaacgcgacgatgctcgcgagcgacttcgtgctgggcatcggcaaccgt
tgggccaaccggcacacgggttcggtcgacgtctacaccaagggccgcaccttcgtgcac
gtggacatcgagcccacgcagatcggccgcgtgttcacgcccgacttcggcatcgtgtcc
gacgccaaggccgcgctcgagcagttcgtggccgtggccgaggagatgaaggccgccggc
aagctgcgcgaccggcgcgagtgggccaggtcgtgcatcgagcgcaagaagaccatgctg
cgcaagaccaacttcgacgaagtgccaatgaagccgcagcgcgtgtaccagtgcatgaac
aacaacttcagcaacgacacctgctacgtgagcaccatcggcctctcgcagatcgcggcc
gcgcagttcctgcacgtgtacaacccgcgccactggatcaactgcggccaggccggcccg
ctgggctggaccattcccgccgcgctgggcgtgcgggcggccgacccttcgcgcaagatc
gtcgcgctctcgggcgactacgacttccagttcatgatcgaggagctcgcggtgggtgcg
cagttcaagctgccgtacatccacatcgtggtcaacaactcctaccttggcctgatccgc
caggcgcagcgcggcttcgagatggactactgcgtgcagctcgcgttcgacaacatcaac
gcggggcccgatgcgggcatcgaaagcagctacggcgtggaccacctgaaagtggtcgag
ggcctgggctgcaaggcgatccgcgtgaaccggcaggaagagatcgcgccggccatccag
cgcgccgaggcgctgatggccgagttcagcgtgccggtcgtcatcgaggtgatgctggag
cgcgtgaccaacatcgcgatgggcaccgagatcgacaacatcaccgagttcgagccgctg
gccgagcatccggccgatgcgccgaccgccgtcgcggccgagatgctggactga
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