Variovorax paradoxus S110: Vapar_3966
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Entry
Vapar_3966 CDS
T00916
Name
(GenBank) transcriptional regulator, AsnC family
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vap03000
]
Vapar_3966
03036 Chromosome and associated proteins [BR:
vap03036
]
Vapar_3966
Transcription factors [BR:
vap03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
Vapar_3966
Chromosome and associated proteins [BR:
vap03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
Vapar_3966
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_24
HTH_AsnC-type
AsnC_trans_reg
MarR
Fe_dep_repress
MarR_2
DUF7343
HTH_IclR
NirdL-like_HTH
HTH_Crp_2
LexA_DNA_bind
HTH_11
HTH_20
HTH_DeoR
DDRGK
HemN_C
AbiEi_4
DegV
HTH_10
HTH_47
Put_DNA-bind_N
HTH_Mga
HTH_28
DUF6262
HTH_39
E3_UFM1_ligase
Motif
Other DBs
NCBI-ProteinID:
ACS20580
UniProt:
C5CVS7
LinkDB
All DBs
Position
1:complement(4209358..4209825)
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AA seq
155 aa
AA seq
DB search
MPELDRIDRKILDLLQRQGRISMTELAERIGLSASPCAERVKRMEREGVISGYHAHVSPE
ALGKTLLVFVEIKLSAKSGEVFDKVRKELLHMPEVLECHLVSGSFDYLVKARLSGMSEYR
HLLGDILKKLPVAAESHSYVVMEEIKETLMLAVDR
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactcgaccgtatcgaccgcaagatcctcgacctgctgcagcgccagggccgc
atttccatgaccgaactcgccgagcgcatcggcctgtcggcatcgccctgcgccgagcgc
gtgaagcgcatggaacgcgagggcgtcatcagcggctaccacgcgcatgtgtcgcccgag
gcgctgggcaagacgctgctggtgttcgtggaaatcaagctctcggccaagtcgggcgag
gtgttcgacaaggtgcgcaaggagctgctgcacatgcccgaggtgctcgagtgccacctg
gtctcgggcagcttcgactatctggtgaaggcgcgcctgagcggcatgagcgaataccgg
cacctgctgggcgacatcctcaagaagctgcccgtggcggccgagtcgcacagctacgtg
gtgatggaggagatcaaggaaacgctgatgctcgcggtcgaccgctga
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