Variovorax paradoxus S110: Vapar_4004
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Entry
Vapar_4004 CDS
T00916
Name
(GenBank) 40-residue YVTN family beta-propeller repeat protein
Organism
vap
Variovorax paradoxus S110
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YNCE
Copper-bind
Cupredoxin_1
Cytochrom_D1
Lactonase
SGL
DUF5074
PQQ_2
Rng_hyd_C
Motif
Other DBs
NCBI-ProteinID:
ACS20618
UniProt:
C5CVW5
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Position
1:complement(4247287..4248540)
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AA seq
417 aa
AA seq
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MIAIPGFVRILVVLAALGASAFCAFAAGPKTYVGNFKDSTVSVIDTGTERVLATVPVATG
PDGIVISPDGRSVFVSGSGASAVSEIDAASDGVARTIEVGKGPQGLAATADGRWLLVAVN
GDDRVAFIDTATHAVGATVPVPKPHTIAVRPDGRQAYVASQEPGHFALVVVDLAARTVVT
EIPLEKAPRDLEFGHDGKALYLTLAGVPAVQVLDPATDQWLAPIPTGVSPHIAQHFAGMA
SGVVVVQGPGEVLLFDPATRAPGRSIAVGKQPHWLDLSADGKKLWVSNEGSNDVSVVDLA
GGPMHTVPVGIAPRKVAVQRAASAGAAPAAQAGGSAQVAIRNFAFEPAQITVKAGQSVTW
KNDDGAPHGIVFKDGTAGMDLMLPGKTFTQTFDKPGVHDYACSVHSYMTARVTVLAP
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgatcgccattcccgggtttgtgcgcatcctcgtcgttctcgcggcgctgggcgcttcg
gccttctgcgccttcgcagccggccccaagacctacgtcggcaatttcaaggacagcacg
gtcagcgtgatcgacaccggcaccgagcgcgtgctcgccaccgtgccggtggccacgggg
ccggacggcatcgtcatctcaccggatgggcgcagcgtgttcgtcagcggctccggcgcc
tcggcggtgagcgagatcgacgcagccagcgacggcgtggcgcgcaccatcgaggtcggc
aagggcccgcagggcctcgccgccacggccgacggacgctggctgctggtggccgtcaac
ggcgacgaccgcgtggccttcatcgacaccgcgacgcacgccgtcggcgccaccgtgccc
gtgcccaagccgcacaccatcgccgtgcggcccgacggccggcaggcctacgtcgcctcg
caggagccggggcactttgcgctggtggtcgtcgacctggcggcgcgcacggtggtcacg
gagatcccgctcgagaaggcgccgcgcgacctggagttcggccacgacggcaaggcgctg
tacctgaccctggcgggcgtgcccgccgtgcaggtgctggacccggcgacggaccagtgg
ctggcgccaataccgaccggcgtgtcgccccacatcgcccagcacttcgccggcatggcg
agcggcgtggtggtcgtgcaggggccgggcgaggtcttgctcttcgacccggcgacgcgg
gcgccgggccgcagcatcgccgtgggcaagcagccgcactggctcgacctgtcggccgac
ggcaagaagctgtgggtgagcaacgaaggctccaacgacgtcagcgtggtcgacctcgca
ggcggcccgatgcacaccgtgccggtcggcattgcgccgcgcaaggtggccgtgcagcgc
gccgcgtccgcaggcgccgcgcctgcggcgcaggccggcggttccgcgcaggtggcgatc
cgcaacttcgccttcgagccggcgcagatcaccgtcaaggcgggccagagcgtgacctgg
aagaacgacgacggcgcgccgcacggcatcgtcttcaaggacggcactgcgggcatggac
ctcatgctgcccggcaagaccttcacgcagactttcgacaagccgggcgtgcacgactac
gcctgctcagtgcattcctacatgacggcgcgcgtgacggtgctcgcaccctga
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