Variovorax paradoxus S110: Vapar_4081
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Entry
Vapar_4081 CDS
T00916
Name
(GenBank) methionyl-tRNA synthetase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00450
Selenocompound metabolism
vap00970
Aminoacyl-tRNA biosynthesis
vap01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
Vapar_4081
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Vapar_4081
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vap01007
]
Vapar_4081
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vap03016
]
Vapar_4081
Enzymes [BR:
vap01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
Vapar_4081
Amino acid related enzymes [BR:
vap01007
]
Aminoacyl-tRNA synthetase
Class I (U)
Vapar_4081
Transfer RNA biogenesis [BR:
vap03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Vapar_4081
Prokaryotic type
Other AARSs
Vapar_4081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
tRNA-synt_1
Anticodon_3
tRNA-synt_1f
tRNA-synt_1e
Anticodon_1
Motif
Other DBs
NCBI-ProteinID:
ACS20694
UniProt:
C5CWT7
LinkDB
All DBs
Position
1:4325470..4327584
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AA seq
704 aa
AA seq
DB search
MSAPRKLFVTTALPYANGKFHIGHMMEYIQADIWVRNQRMNGAEVNFVCADDAHGAAITI
AADKAGVTPQAFVAEIAAGRKPYLDGYYISFDNWHSTDAPENHQLAQDIYRDLRANGLIE
TKSVEQFYDPEKGMFLADRFIKGECPNCHAKDQYGDNCEVCGAVYAPTELINPYSALSGA
KPELRSSDHFFFKLSDPRCEAYLKEWTAAAGHVQSEVQNKIREWLYKDDEGKGGLGDWDI
SRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKNLLDKRCIELGGDGISYTEYMADPDL
EQVHFIGKDIITFHTLFWPAMLHFSGRKAPDAVYVHGHLTVSGEKMSKSRGTGIDPLRYL
SIGLDPEWLRYYIAAKLNGRNEDIDFNPEDFVARVNSDLVGKYINIASRAAGFIGKRFGG
KLGEVSADGDALLFALRDAAPQLHSLYDGRDYARALREVMALADKVNEYVDQNKPWELAK
KEGQEARLHDVCTVCIEAFRLLTLYLKPVLPALAANVEAFLRIEPLAWADAAQSLPAGHA
IGEYKHLMQRADAKMVDKLFDAPEPAPPAAAAAEESLPGGEAIAPAITIDDFAKIDLRIA
KIVACEKVEGSTKLLRLTLDAGEGTDPQGSPVLRNVFSGIASAYQPEQLVGKLTVLVANL
APRKMKFGISEGMVLAASHGDEKAHPGIHVLEPWPGATPGMRVR
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccccgcgcaagctcttcgtcaccaccgccctgccgtatgccaacggcaagttc
catatcggccacatgatggaatacatccaggccgacatctgggtgcggaaccagcgaatg
aatggcgccgaggtcaacttcgtctgcgccgacgacgcgcacggcgcggccatcaccatc
gcggccgacaaggccggcgtgacgccgcaggccttcgtggccgagatcgccgcgggccgc
aagccctacctggacggctactacatctcgttcgacaactggcactcgaccgacgcgccc
gagaaccaccagctcgcgcaggacatctaccgcgacctgcgcgccaacggcctgatcgaa
accaagagcgtcgagcagttctacgaccccgaaaagggcatgttcctggccgaccgcttc
atcaagggcgagtgccccaactgccacgccaaggaccagtacggcgacaactgcgaggtg
tgcggcgcggtctacgcgcccaccgagctgatcaatccctactcggccctgtccggcgcc
aagcccgagctgcgcagctccgaccacttcttcttcaagctctcggacccgcgctgcgag
gcctacctgaaggaatggaccgccgctgccggccacgtgcagtccgaagtgcagaacaag
atccgcgagtggctctacaaggacgacgaaggcaagggcggcctcggcgactgggacatc
agccgcgatgcgccctacttcggcatcgagattcccgatgcgccgggcaagtacttctac
gtgtggctcgatgcgcccgtgggctatctggcctcgctgaagaacctgctcgacaagcgc
tgcatcgagctgggcggcgacggcatctcgtacaccgagtacatggccgaccccgacctg
gagcaggtgcacttcatcggcaaggacatcatcaccttccacacgctcttctggcccgcg
atgctgcacttcagcggccgcaaggcgcccgacgcggtgtacgtgcacggccacctgacg
gtcagcggcgagaagatgagcaagagccgcggcaccggcatcgacccgctgcggtacctg
tcgatcggcctggaccccgaatggctgcgctactacatcgcggccaagctcaacggccgc
aacgaggacatcgacttcaaccctgaagacttcgtcgcgcgcgtcaacagcgacctcgtg
ggcaagtacatcaacatcgcgagccgcgcggcgggcttcatcggcaagcgcttcggcggc
aagctgggcgaggtgtcagccgacggcgacgcactgctgttcgcgctgcgcgatgcggcg
ccgcagctgcattcgctctacgacggccgcgactacgcccgcgcgctgcgcgaggtgatg
gcgctggccgacaaggtgaacgagtacgtcgaccagaacaagccctgggaactggccaag
aaggaaggccaggaagcgcggctgcacgacgtgtgcaccgtgtgcatcgaggccttccgc
ctgctcacgctgtacctgaagccggtgctgccggcgctcgccgccaatgtcgaagccttc
ctccggatcgagccgctcgcgtgggccgatgccgcgcagagcctgccggccggccacgcc
atcggcgaatacaagcacctgatgcagcgcgccgacgccaagatggtcgacaagctgttc
gacgcgcccgagcccgcaccaccggccgccgccgcggcagaagaatcgctgccgggcggc
gaagccatcgcgcccgccatcaccatcgacgacttcgccaagatcgacctgcgcatcgca
aagatcgtggcctgcgagaaggtcgagggctcgaccaagctgctgcgcctgacgctcgac
gcgggcgagggcaccgacccgcaggggagtcctgttctgcgcaacgtgttcagcggcatc
gcctccgcttaccagcccgagcagctcgtgggcaagctcacggtgctggtcgccaacctc
gcgccgcgcaagatgaagttcggcatcagcgaaggcatggtgctggccgcaagccatggc
gacgaaaaagcccaccccggcatccacgtgctcgagccctggccgggcgcgacgccgggc
atgcgcgttcgctga
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