Variovorax paradoxus S110: Vapar_4168
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Entry
Vapar_4168 CDS
T00916
Name
(GenBank) flagellar M-ring protein FliF
KO
K02409
flagellar M-ring protein FliF
Organism
vap
Variovorax paradoxus S110
Pathway
vap02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Vapar_4168
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vap02044
]
Vapar_4168
02035 Bacterial motility proteins [BR:
vap02035
]
Vapar_4168
Secretion system [BR:
vap02044
]
Type III secretion system
Flagellar export apparatus
Vapar_4168
Bacterial motility proteins [BR:
vap02035
]
Flagellar system
Flagellar assembly proteins
M, S, P and L rings
Vapar_4168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YscJ_FliF
YscJ_FliF_C
DUF7443
Motif
Other DBs
NCBI-ProteinID:
ACS20781
UniProt:
C5CXS5
LinkDB
All DBs
Position
1:4409692..4411374
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AA seq
560 aa
AA seq
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MSSAAPAGTGPAPSPASGLAERLRTQPKLPLIAGAAAIAAAAAAFLLWSRAPDYGVLYTN
VTDRDGGAIIASLQQMNVPYKFAEGGGAILVARDRVPEVRLKLASQGLPKGGGVGFELMD
NQKFGTSNFAEQVNYQRGLEGELARSVESIGSVESARIHLALPKPSLFVRDQKKPSASVI
LTLHRGRSIDEGQVSAIVHMVSSSVPDLDAKSVTVVDQRGNLLSAANAGARGLDVSQLKY
AQEIEQGYIRRIEAILQPLVGASNVRAQVAAEIDFSVVERTEESYKPNQDPRAAAVRSQQ
SSESMQQGATPPGGVPGALSNQPPQTPSAPITAPPNAAAAAPKAAATATAASTAPGSSRK
DTTTNYELDRSIRHVQQGAGGVKRLSVAVVVNHRDTADSAGKPGQRALTPAEIEQIRNLV
KEAMGFSQERGDSLNVVNSAFAREGGDAEAGPALPFWRDPANLGLAMSIAQYLLMAGLAL
FAWFAVLRPLLRKHLAPPAAAVPEAAPAAPGAADDDGTAAQNNARLREIERQKADLDYAH
QTADQDPRLVATLIKHWMNS
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgagttcggcggcccccgcgggcaccggcccggcgccctcgcccgcctccggccttgcc
gagcgcctgcgcacccagccgaagctgccgctgatcgccggcgcggccgccattgccgcg
gccgccgcggcgttcctgctgtggagccgcgcgcccgactacggcgtgctctacaccaac
gtgacggaccgcgacggcggcgccatcatcgcgtcgctgcagcagatgaacgtgccctac
aagttcgccgagggcggcggcgcgatcctggtggcgcgcgacagggtgcccgaagtgcgc
ctgaagctcgcgtcgcagggcctgcccaagggcggcggggtcggcttcgagctgatggac
aaccagaagttcggcaccagcaacttcgccgaacaggtcaactaccagcgcgggctcgaa
ggcgagctggcgcgctcggtcgaatcgatcggctcggtggaatcggcgcgcatccacctg
gcgctgcccaagccttcgctcttcgtgcgcgaccagaagaagccctcggcctcggtgatc
ctgacgctgcaccgcggccgcagcatcgacgagggccaggtcagcgccatcgtgcacatg
gtctccagcagcgtgcccgacctggacgccaagagcgtgaccgtggtcgaccagcgcggc
aacctgctgtcggccgccaatgccggcgcacgcgggctggacgtgagccagctcaagtac
gcgcaggaaatcgagcagggctacatccgccgcatcgaggcgatcctgcagcccctcgtg
ggcgcgagcaacgtgcgcgcgcaggtggcggccgagatcgacttttccgtggtcgagcgc
accgaggaaagctacaagccgaaccaggacccgcgcgccgcggccgtccgcagccagcag
tcgagcgagtcgatgcagcagggcgccacgccgccgggcggcgtgccgggcgccttgtcg
aaccagccgccgcagacgccgagcgcgcccatcaccgcgccgccgaacgccgcggcggct
gcgccgaaggccgcggcaaccgccacggcggccagcacggcaccgggcagttcgcgcaag
gacacgacgaccaactacgagctcgaccgttcgatccgccatgtgcagcagggcgcgggc
ggcgtgaagcggctgtcggtggccgtggtggtgaaccaccgcgacaccgcggacagcgcc
ggcaagccgggccagcgcgcgctcacgccggccgagatcgagcagatccgcaacctggtc
aaggaagcgatgggcttcagccaggagcgcggcgactcgctcaacgtggtcaacagcgcc
ttcgcccgcgaaggcggcgacgcagaagccgggcccgcgctgccgttctggcgcgacccc
gccaacctcgggctcgccatgagcatcgcgcagtacctgctgatggccggcctcgcgctg
ttcgcctggttcgcggtgctgcggccgctgctgcgcaagcacctcgcgccgcccgccgcc
gcggtgcccgaagcggcgccggccgcccctggcgcggccgacgacgacggaacggccgcg
cagaacaacgcgcggctgcgcgagatcgagcgccagaaggccgacctcgactacgcgcac
cagaccgccgaccaggacccgcgcctggtcgccacgctgatcaagcattggatgaattca
tga
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