Variovorax paradoxus S110: Vapar_4197
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Entry
Vapar_4197 CDS
T00916
Name
(GenBank) flagellar hook capping protein
KO
K02389
flagellar basal-body rod modification protein FlgD
Organism
vap
Variovorax paradoxus S110
Pathway
vap02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Vapar_4197
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
vap02035
]
Vapar_4197
Bacterial motility proteins [BR:
vap02035
]
Flagellar system
Flagellar assembly proteins
Rod and hook
Vapar_4197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FlgD
FlgD_ig
FLgD_tudor
DUF2271
MG2
CHU_C
Motif
Other DBs
NCBI-ProteinID:
ACS20810
UniProt:
C5CXV4
LinkDB
All DBs
Position
1:complement(4441575..4442261)
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AA seq
228 aa
AA seq
DB search
MAISDTSSISGLNAATAASSAGNVSGADSEQRFLKLLVTQLNNQDPLNPMENAELTSQLA
QMSTVSGIERLNTALSGLVNQTGANQVLQAASLIGYNVLSPGNALSTSEPKAGEAPAAVP
FAVQLPATAGTVEVKIVNAAGNTVRTLTLGPMTEGVNAVSWDGKADDGSTAPAGAYSFSV
AAANNGTRVEATSLVFSQVAAVKQGASGVTLELMSGQSIGLADVRMFL
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggccatttccgacacctcttccatctccgggctcaacgcagccaccgccgcgtcgagc
gccggcaacgtctcgggagcggacagcgagcagcgcttcctcaagctgctggtgacgcag
ctcaacaaccaggacccgctcaacccgatggagaacgccgagctcacgtcgcagctcgcg
cagatgagcaccgtgagcggcatcgagcggctcaacaccgcgctcagcggactggtgaac
cagaccggcgccaaccaggtgctgcaggcggcatcgctcattggctacaacgtgctgtcg
cccggcaatgctctcagcacctccgagcccaaggccggcgaggcgccggcggccgtgccc
tttgccgtgcagctgccggccaccgccggcaccgtcgaagtgaagatcgtcaatgccgcg
ggcaacaccgtgcgcaccttgacgctcggcccgatgaccgaaggcgtcaacgccgtcagc
tgggacggcaaggccgacgacggcagcacggccccggcgggcgcctacagcttcagcgtc
gcggccgccaacaacggcacgcgcgtggaggccacgtcgctggtcttctcgcaggtggcc
gccgtcaagcagggcgccagcggcgtcacgctcgaactgatgtcgggccagagcatcggc
ctggccgacgtgcgcatgttcctctga
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