Variovorax paradoxus S110: Vapar_4212
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Entry
Vapar_4212 CDS
T00916
Name
(GenBank) prolyl-tRNA synthetase
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Vapar_4212
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vap01007
]
Vapar_4212
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vap03016
]
Vapar_4212
Enzymes [BR:
vap01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
Vapar_4212
Amino acid related enzymes [BR:
vap01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
Vapar_4212
Transfer RNA biogenesis [BR:
vap03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Vapar_4212
Prokaryotic type
Vapar_4212
BRITE hierarchy
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GFIT
Motif
Pfam:
tRNA-synt_2b
tRNA_edit
HGTP_anticodon
FlaA
Motif
Other DBs
NCBI-ProteinID:
ACS20825
UniProt:
C5CXW9
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All DBs
Position
1:complement(4452457..4454202)
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AA seq
581 aa
AA seq
DB search
MKASRFFVSTLKEAPADAEVASHRLMMRAGMIKKLGTGIYTYMPMGLRVIRKVEAIVREE
MNRAGAVELTMPVVQPAEFWQETGRFDKMGPELLRIKDRHDRDFVVQPTSEEVVTDIARQ
EIRSYKQLPKNFYQIQTKFRDERRPRFGLMRGREFIMKDAYSFDRDLDAAKASYQAMADA
YRRIFDRFGLRYRAVAADSGAIGGDLSEEFQVIAATGEDAIVYCPGSDYAANMEKAEALA
PAGPRPAAAKALEKTPTPGKSTCADVAELLGVPLSTTVKSLVLATDILDEAGNPKGSQVW
LLLLRGDHDMNEIKVGKVPGLDKGFRFATLAEIDDHFGCKPGYLGPLNLKKPVRLVADRE
VMVMADWITGANEVDFHMTGVNWGRDLPEPELVADLRNVVAGDASPDGKGVLAIERGIEV
GHVFVLGTKYSKDMNATYLDEAGKPQFLEMGCYGIGITRLPAAAIEQNHDERGIIWPDAL
APFTVVVCPIGMDRSPEVKVAAEALYEQLLAAGVDVLLDDRGERPGAMFADWELIGVPHR
VVISDRGLKEGQLEYQHRRDTAATKVPAAGIAEFIAGKFAQ
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcttcccgattttttgtctccaccctcaaggaagcgcccgctgacgccgaggtc
gcgagccatcggctcatgatgcgcgcgggcatgatcaagaagctcggcacgggcatctac
acctacatgccgatggggctgcgcgtgatccgcaaggtcgaggcgatcgtgcgcgaggaa
atgaaccgcgccggcgcggtcgagctcacgatgcccgtggtgcagccggccgagttctgg
caggagaccggccgcttcgacaagatgggccccgagctgttgcgcatcaaggaccggcac
gaccgcgacttcgtggtccagcccaccagcgaagaggtggtgaccgacatcgcgcgccag
gaaatccgcagctacaagcagctgccgaagaatttctaccagatccagaccaagttccgc
gacgagcgccgtccgcgcttcggcctgatgcgcgggcgcgaattcatcatgaaggacgcc
tacagcttcgaccgcgacctggatgccgccaaggccagctaccaggccatggccgatgcc
taccgccgcatcttcgaccgcttcggcctgcgctaccgcgccgtggcggccgacagcggc
gccatcggcggcgacctgagcgaagagttccaggtgattgccgccaccggcgaagacgcc
atcgtctactgccccggcagcgactacgcagccaacatggaaaaggccgaggcgctcgct
ccggccggcccgcgcccggcagcggccaaggcgctcgagaagacgcccaccccgggcaag
agcacctgcgccgacgtggccgaactgctcggcgtgccgctctcgaccaccgtcaagtcg
ctggtgctggcaacggacatcctcgacgaggccggcaaccccaagggttcgcaggtctgg
ctgctgctcctgcgcggcgaccacgacatgaacgagatcaaggtcggcaaggtgccgggc
ctggacaagggcttccgcttcgcgacgctggccgagatcgacgaccacttcggctgcaag
cccggctacctcggcccgctgaacctcaagaagcccgtcaggctcgtggccgaccgcgag
gtgatggtcatggccgactggatcaccggcgccaacgaggtcgacttccacatgaccggc
gtcaactggggccgcgacctgcccgagcccgaactggtggccgacctgcgcaacgtggtg
gcgggcgacgcctcgcccgacggcaagggcgtgctcgcgatcgagcgcggcatcgaggtg
ggccacgtgttcgtgctcggcaccaagtacagcaaggacatgaacgccacctacctggac
gaagccggcaagccgcagttcctcgagatgggctgctacggcatcggcatcacgcgcctg
ccggccgccgccatcgagcagaaccacgacgagcgcggcatcatctggcccgacgcgctg
gcgccgttcacggtggtggtctgcccgatcggcatggatcgcagccccgaggtcaaggtg
gcggccgaagcgctgtacgagcagctgctcgcggccggcgtcgacgtgctgctggacgac
cgcggcgagcgcccgggcgcgatgttcgccgattgggaactgatcggcgtgccgcaccgc
gtggtcatttccgaccgcggcctgaaggaaggccagctcgaataccagcaccgccgcgac
acggcggccaccaaggtgcctgccgcgggcatcgccgaattcatcgccggcaagttcgcg
caatga
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