Variovorax paradoxus S110: Vapar_4220
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Entry
Vapar_4220 CDS
T00916
Name
(GenBank) type IV-A pilus assembly ATPase PilB
KO
K02652
type IV pilus assembly protein PilB
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vap02044
]
Vapar_4220
02035 Bacterial motility proteins [BR:
vap02035
]
Vapar_4220
Secretion system [BR:
vap02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Vapar_4220
Bacterial motility proteins [BR:
vap02035
]
Pilus system
Pilus assembly proteins
Vapar_4220
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
MshEN
AAA_16
AAA_22
HerA_C
AAA_30
nSTAND3
AAA_19
AAA_7
ATPase
DEAD
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ACS20833
UniProt:
C5CXX7
LinkDB
All DBs
Position
1:4459972..4461705
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AA seq
577 aa
AA seq
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MAAAELPVKENTQIALPGLARALVSAGKLPAKTAEDIYQKSLSGRTSFIAELTGSGAVSA
ADLAHTLSSAFGAPLLDLDAIDHQRLPKDLLDPKLCHAYRIVVLSKRNNRLIVATADPSD
QQAVEKIKFASQMGVDWVIAEYDKLSRMIEAAAVTAAETINSIVGAEFEFDDVSADTSGD
ANEQAIAEVEDAPVVRFLHKMLLDGVSMRASDIHFEPYEHNYRVRFRIDGELREIASPPT
LIKDKLASRIKVISRLDISEKRVPQDGRMKLKIGPDRVIDFRVSTLPTLFGEKIVIRILD
PSSARLGIDALGYDADEKERLLHAIGRPYGMVLVTGPTGSGKTVSLYTCLNLLNQPGVNI
ATAEDPSEINLPGVNQVNVNERAGLTFAAALRAFLRQDPDIIMVGEIRDLETADISIKAA
QTGHLVLSTLHTNDAPTTLTRMRNMGIAPFNIASSVILITAQRLARRLCHVCRAPADMPR
QALLDAGFKEEQLDGTWKPYRPVGCAACSNGYKGRVGIYQVMPISEAIQAIILRDGSALD
IARQSEAEGVRSLRQSGLRKVMQGLTSLEEVVAVTNE
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgccgaacttcctgttaaagaaaacacgcaaatcgccctcccgggccttgcg
cgtgccttggtctcggccggcaagcttcctgcgaagaccgcggaagacatctatcaaaag
tcgctgagcggccgcaccagcttcattgccgagctgaccggcagcggcgccgtctcggcc
gccgacctcgcccacacgctgtccagcgccttcggcgcgccgctgctggacctggacgcc
atcgaccaccagcgcctgcccaaggacctgctcgacccgaagctgtgccacgcctaccgg
atcgtggttctcagcaagcgcaacaaccgtctcatcgttgcaacggccgacccttcggac
cagcaggcggtggaaaagatcaagttcgcctcccagatgggcgtggactgggtcattgcc
gaatacgacaagctctcgcgcatgatcgaagccgccgcggtcactgcggcggaaaccatc
aacagcatcgtcggcgccgagttcgagttcgacgacgtctcggcggacacctcgggcgat
gccaacgaacaggccatcgccgaggtcgaggacgcgccggtcgtgcgcttcctgcacaag
atgctgctcgacggtgtcagcatgcgggcctcggacatccacttcgagccctacgagcac
aactaccgggtgcgctttcgcatcgacggcgagctgcgcgagatcgcgagcccgcccacg
ctcatcaaggacaagctggcgtcgcgcatcaaggtcatctcgcggctcgacatttcggag
aagcgcgtgccgcaggacggccgcatgaagctcaagatcgggcccgaccgcgtgatcgac
ttccgcgtcagcacgctgcccacgctgttcggcgagaagatcgtgatccgtatcctggac
ccgagcagcgcgcgcctgggcatcgacgcactgggctacgacgccgacgaaaaggagcgc
ctgctgcatgcgatcggccgcccctatggcatggtgctggtgacgggccccacgggttcg
ggcaagacggtgtcgctctacacctgcctgaacctgctgaaccagcccggcgtcaacatc
gccacggcggaagacccgtccgaaatcaacctgccgggcgtgaaccaggtgaacgtcaac
gagcgcgccgggctcaccttcgcggcggcgctgcgcgccttcctgcggcaggatcccgac
atcatcatggtcggcgaaatccgcgacctcgaaaccgccgacatctcgatcaaggccgcg
cagacgggccacctggtgctctcgacgctgcacaccaacgacgcgccgaccacgctcacg
cgcatgcgcaacatgggcatcgcgccgttcaacattgcctccagcgtgatcctgatcacg
gcgcagcggctcgcgcggcgcctgtgccacgtatgccgcgcgccggccgacatgccgcgc
caggcgctgctggatgcgggcttcaaggaagaacagctcgacggtacctggaagccctat
cggccggtcggctgcgcggcctgcagcaacggctacaagggccgggtcggcatctaccag
gtgatgccgatctcggaagccatccaggccatcatcctgcgcgacggcagcgcactcgac
atcgcgcgccagtccgaggccgagggcgtgcgctcgctgcggcagtcgggcctgcgaaaa
gtcatgcaagggctcacctcactcgaagaagtggtggcggtcaccaacgaataa
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