Variovorax paradoxus S110: Vapar_4295
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Entry
Vapar_4295 CDS
T00916
Name
(GenBank) Extracellular ligand-binding receptor
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vap
Variovorax paradoxus S110
Pathway
vap02010
ABC transporters
vap02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Vapar_4295
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Vapar_4295
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vap02000
]
Vapar_4295
Transporters [BR:
vap02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Vapar_4295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
CW_binding_2
Motif
Other DBs
NCBI-ProteinID:
ACS20907
UniProt:
C5CYU6
LinkDB
All DBs
Position
1:4538742..4539920
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AA seq
392 aa
AA seq
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MTIKFVAALAVSLATIAFQARADVIKVGVIAPMSGPFSAVGQTWEGATKAYQKLNGTTVG
KHTIEVIYRDLPEINPAQAKALAQELIVKEGAQYIAGLYFTPDTLAVAALAQEAKVPVVI
FNASTSSLLDKSDFLLRTSYTLPQMAVPVAKYALEKNVRNAVTLVSDFGPGLDAEKSFTT
AFVSGGGKLLEAIRAPLKTTDFGPLMQRVKALKPDALYVFAPGGPATYAMVKAYNEAGLR
AAGVRFLGTAETDEDQLRAIGPDLLGIETGMFYSATHNSALNNAVIKALGEVAPKAIPTV
QLANAYDGLHVIYHMVKATDGKRDGAKALASAKGHSWESPRGPVKIDPASREFVQNVYMR
VVEKDPSGRYVNREFRTFEMQPDYGRTQNASK
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcaaattcgttgccgccttggcggtctcactcgcgacgatcgcctttcaggcc
cgcgccgacgtcatcaaggttggcgtcatcgcgccgatgtccggaccgttttcagccgtg
gggcaaacctgggagggtgcgaccaaggcgtaccagaagctcaatggcacgaccgtgggc
aaacacacgatcgaggtcatctatcgcgaccttccggagatcaaccccgcgcaagccaag
gccctggcacaggaactgattgtcaaggaaggcgcccagtacatcgccgggctctatttc
acccctgacaccttggccgtggctgcgctcgcgcaggaggccaaggtaccggtcgtgatc
ttcaacgcatcgacgtcctcgcttctggacaagtcggacttcctgctgcgcacgtcgtac
accctgccgcagatggcggtgcccgtggccaaatacgcgctggagaagaacgtcaggaat
gccgtcacgctggtcagcgactttggtcccggcctggacgccgagaagtctttcaccacg
gcgtttgtcagcggcggaggcaagctgctcgaggccatccgcgcgccgttgaagacgacc
gactttggtcctctgatgcagcgcgtgaaggcgctcaagcccgatgccctctacgtcttc
gccccaggcggtcctgcgacctacgcgatggtcaaggcatacaacgaggctgggttgagg
gcggccggcgtgcgctttctcggcacggccgagaccgatgaggaccagctgcgagcgatc
ggcccggatcttctcggcatcgagacgggcatgttctattcggcaacgcacaactctgcg
ctgaacaacgctgtcatcaaggccctcggcgaggttgcccccaaggccattccgaccgtc
cagcttgcgaacgcgtatgacggtctgcatgtgatctatcacatggtcaaggcaaccgat
gggaagcgggacggcgccaaggcgcttgccagcgccaagggtcattcctgggaaagtccg
cgaggccccgtgaagatcgacccggcttcgcgcgagttcgtgcagaacgtctacatgcgc
gtggtcgaaaaggacccgtccggacgctacgtcaaccgggaattccggacgttcgagatg
cagcccgattacggccgcacgcagaacgcttccaagtaa
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