KEGG   Variovorax paradoxus S110: Vapar_4298
Entry
Vapar_4298        CDS       T00916                                 
Name
(GenBank) ABC transporter related
  KO
K01995  branched-chain amino acid transport system ATP-binding protein
Organism
vap  Variovorax paradoxus S110
Pathway
vap02010  ABC transporters
vap02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:vap00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    Vapar_4298
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Vapar_4298
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:vap02000]
    Vapar_4298
Transporters [BR:vap02000]
 ABC transporters, prokaryotic type
  Phosphate and amino acid transporters
   Branched-chain amino acid transporter
    Vapar_4298
SSDB
Motif
Pfam: ABC_tran AAA_21 BCA_ABC_TP_C AAA_29 AAA_23 SMC_N RsgA_GTPase AAA MMR_HSR1 AAA_28 AAA_25 AAA_5 AAA_22 AAA_30 Zeta_toxin AAA_15 TsaE AAA_24 DLIC AAA_13
Other DBs
NCBI-ProteinID: ACS20910
UniProt: C5CYU9
LinkDB
Position
1:4541812..4542576
AA seq 254 aa
MTHRLQTHGLCHSFGGLAVTQNVTLSLPPGARTALIGPNGAGKTTLVNLLSGAMRPQSGD
IQLDGRSIVQLPQYARVRNGIVRTFQISRLFKELTVADNVRVAVLQRHRASMQWWPSPVR
SARVQKDVDETLGMLGLHPYANRVVGQLALGEQRLAEIALALAMRPQVLLLDEPGAGVPQ
GEGGRIMEAIGSLPKDLSVLLIEHDMDLVFRFASHIIVLVAGAVMVEGTPQEVAANEQVK
QIYFGRDGHAQAHH
NT seq 765 nt   +upstreamnt  +downstreamnt
atgacccaccgactccaaacccacggcctgtgtcactcctttggcggcctggcagtcacg
cagaacgtcacgctgtccctccccccaggagcccgcactgcattgatcggtccgaatggc
gctggcaagacgactttggtcaacctgctgagcggggcgatgcgcccgcagtcgggtgac
atccagctggacggccgctcgatcgtccagctgccgcagtacgcacgcgtgcgcaacggc
atcgttcgcacgttccagatcagccgcctcttcaaggaactcaccgtggcggacaacgtc
agggtcgccgtgttgcagcggcaccgggcttccatgcagtggtggccctcgccagtgcgt
tccgcacgcgtgcaaaaagatgtcgacgagacactcggtatgctgggactgcacccctat
gcgaaccgggtggtgggacaactggcactgggcgagcagcggcttgcggagatcgccctg
gcgctcgcgatgaggccgcaggtgctgctcctcgatgagccgggcgcaggcgtgccgcag
ggtgagggcggccggatcatggaagccatcgggagcttgccgaaggatctatccgtcctg
ctgatcgagcacgacatggacctggtgttccggttcgcgtcgcacatcatcgtcctggtc
gccggtgcggtgatggtcgaggggacgccgcaggaagtcgctgccaacgagcaggtcaag
caaatctacttcggacgagacggtcatgcccaagcccaccattga

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