Variovorax paradoxus S110: Vapar_4298
Help
Entry
Vapar_4298 CDS
T00916
Name
(GenBank) ABC transporter related
KO
K01995
branched-chain amino acid transport system ATP-binding protein
Organism
vap
Variovorax paradoxus S110
Pathway
vap02010
ABC transporters
vap02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Vapar_4298
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Vapar_4298
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vap02000
]
Vapar_4298
Transporters [BR:
vap02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Vapar_4298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
BCA_ABC_TP_C
AAA_29
AAA_23
SMC_N
RsgA_GTPase
AAA
MMR_HSR1
AAA_28
AAA_25
AAA_5
AAA_22
AAA_30
Zeta_toxin
AAA_15
TsaE
AAA_24
DLIC
AAA_13
Motif
Other DBs
NCBI-ProteinID:
ACS20910
UniProt:
C5CYU9
LinkDB
All DBs
Position
1:4541812..4542576
Genome browser
AA seq
254 aa
AA seq
DB search
MTHRLQTHGLCHSFGGLAVTQNVTLSLPPGARTALIGPNGAGKTTLVNLLSGAMRPQSGD
IQLDGRSIVQLPQYARVRNGIVRTFQISRLFKELTVADNVRVAVLQRHRASMQWWPSPVR
SARVQKDVDETLGMLGLHPYANRVVGQLALGEQRLAEIALALAMRPQVLLLDEPGAGVPQ
GEGGRIMEAIGSLPKDLSVLLIEHDMDLVFRFASHIIVLVAGAVMVEGTPQEVAANEQVK
QIYFGRDGHAQAHH
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgacccaccgactccaaacccacggcctgtgtcactcctttggcggcctggcagtcacg
cagaacgtcacgctgtccctccccccaggagcccgcactgcattgatcggtccgaatggc
gctggcaagacgactttggtcaacctgctgagcggggcgatgcgcccgcagtcgggtgac
atccagctggacggccgctcgatcgtccagctgccgcagtacgcacgcgtgcgcaacggc
atcgttcgcacgttccagatcagccgcctcttcaaggaactcaccgtggcggacaacgtc
agggtcgccgtgttgcagcggcaccgggcttccatgcagtggtggccctcgccagtgcgt
tccgcacgcgtgcaaaaagatgtcgacgagacactcggtatgctgggactgcacccctat
gcgaaccgggtggtgggacaactggcactgggcgagcagcggcttgcggagatcgccctg
gcgctcgcgatgaggccgcaggtgctgctcctcgatgagccgggcgcaggcgtgccgcag
ggtgagggcggccggatcatggaagccatcgggagcttgccgaaggatctatccgtcctg
ctgatcgagcacgacatggacctggtgttccggttcgcgtcgcacatcatcgtcctggtc
gccggtgcggtgatggtcgaggggacgccgcaggaagtcgctgccaacgagcaggtcaag
caaatctacttcggacgagacggtcatgcccaagcccaccattga
DBGET
integrated database retrieval system