Variovorax paradoxus S110: Vapar_4330
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Entry
Vapar_4330 CDS
T00916
Name
(GenBank) DNA-directed RNA polymerase, omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Vapar_4330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vap03021
]
Vapar_4330
03400 DNA repair and recombination proteins [BR:
vap03400
]
Vapar_4330
Enzymes [BR:
vap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Vapar_4330
Transcription machinery [BR:
vap03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Vapar_4330
DNA repair and recombination proteins [BR:
vap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Vapar_4330
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
ACS20941
UniProt:
C5CYY0
LinkDB
All DBs
Position
1:4574616..4574819
Genome browser
AA seq
67 aa
AA seq
DB search
MARITVEDCLLQIPNRFQLVLAATYRARMLSQGHAPKIESKNKPAVTALREIAEGKIGLE
MLKKVPG
NT seq
204 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcatcaccgtcgaagattgcctgcttcagatccccaaccgcttccagctggtc
ctggccgccacctatcgtgcgcgcatgctgagccagggccatgcacccaagatcgagagc
aagaacaagcccgccgtcacggccctgcgcgaaatcgccgaaggcaagatcggccttgaa
atgctcaagaaggtgccgggctga
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