Variovorax paradoxus S110: Vapar_4331
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Entry
Vapar_4331 CDS
T00916
Name
(GenBank) (p)ppGpp synthetase I, SpoT/RelA
KO
K01139
GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:
2.7.6.5
3.1.7.2
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00230
Purine metabolism
vap01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
Vapar_4331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vap03009
]
Vapar_4331
Enzymes [BR:
vap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.6 Diphosphotransferases
2.7.6.5 GTP diphosphokinase
Vapar_4331
3. Hydrolases
3.1 Acting on ester bonds
3.1.7 Diphosphoric-monoester hydrolases
3.1.7.2 guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
Vapar_4331
Ribosome biogenesis [BR:
vap03009
]
Prokaryotic type
Other maturation factors
Vapar_4331
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HD_4
RelA_SpoT
TGS
RelA_RIS
ACT_4
HD
ACT
ThiS
UreF
ACT_AHAS_ss
DUF1087
RelA_AH
Motif
Other DBs
NCBI-ProteinID:
ACS20942
UniProt:
C5CYY1
LinkDB
All DBs
Position
1:4574921..4577179
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AA seq
752 aa
AA seq
DB search
MSAVAKHQSHAPTGGTPKPSPAALNAAAASFAALTARLDYLSPEDTELVRRAYRFADEAH
LGQLRNSGEPYITHPIAVAAQCAEWKLDAQALMAALLHDAIEDCGVTKPELIERFGAPVA
ELVDGLTKLDKLQFNTREENQAESFRKMLLAMARDVRVILVKLADRTHNMRTLDDAPREK
WARISRETLEIYAPIAHRLGLNQTYRELQELSFRHLKPWRYATLSKAVAKARGRRRDLIQ
KVQREVETAFANANMTLRIAGREKTLYSIYRKMEEKHLSFAQVTDIYGFRLIVPNVIACY
TGLGILHQMYKPLPGKFKDHIAIAKLNGYQSLHTTLVGPAGVNVEFQLRTEAMHVVAESG
VAAHWLYKAAEPNAASNDRLGTKWLQSLLDIQDETRDAAEFWDHVKVDLFPDAVYVFTPK
SQILALPRGATVVDFAYAIHSNIGDHTSAARINGDQVPLRTELKNGDVVEVITAPVSTPN
PAWLGFVRTGRARSKIRHYLKTLAHAESEGLGEKLLAQALRAEGLSKLPAEDAEHQALWE
KLLRFTGNRTRAELLTDIGLGKRIASIVAKRLVAMLSELGERPDALLLSRERFISHETIS
QGAVTLDGSENSSVRFALCCRPIPGDEIVGYLGHGEGLVVHTESCGVGQRLRHKDSERFF
AVEWADEPTRTFETGVVITVRNDKGVLARVAATLADAEADITHVEMADETPQDSTDLRFV
IAVRDRTHLDGVLRAARRTASVLTAARTVPAP
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcggttgccaaacatcagtcccatgcccccacggggggcacgcccaagccgagt
ccggcggcgctgaatgcggctgccgcgagctttgctgcgctgaccgccaggctcgactac
ctgagccccgaagacaccgagctggtccggcgcgcctaccgctttgccgacgaagcccac
ctgggccagctgcgcaacagcggcgagccctacatcacccaccccattgccgtagcggcg
caatgcgccgaatggaagctcgacgcacaggcgctgatggccgccctgctgcacgatgcc
atcgaggactgcggggtcaccaagcccgagctgatcgagcgcttcggcgcgccggtggcc
gagctggtcgacgggctcaccaagctggacaagctgcagttcaacacccgcgaggaaaac
caggccgagtcgttccgcaagatgctgctggccatggcgcgcgatgtgcgcgtgatcctg
gtcaagctggccgaccgcacgcacaacatgcgcacgctcgacgatgcgccgcgcgagaaa
tgggcccggatctcgcgcgaaacgctcgagatctacgcgcccattgcgcaccggctgggc
ctgaaccagacctaccgcgaactgcaggaactctcgttccgccatctgaaaccgtggcgc
tacgccaccctgtccaaggcggtggccaaggcgcgcgggcgccgccgcgacctgatccag
aaggtgcagcgcgaggtcgagaccgcctttgccaacgccaacatgacgctgcgcatcgcg
ggacgcgagaaaacgctctattcgatctaccgcaagatggaagaaaagcacctgagcttc
gcccaggtgaccgacatctacggctttcgcctgatcgtgccgaacgtgatcgcctgctac
accggcctgggcatcctgcaccagatgtacaagccgctgccgggcaagttcaaggaccac
atcgcgatcgccaagctcaacggctaccagtcgctgcacaccacgctggtgggcccggcc
ggcgtgaacgtggagttccagctgcgcaccgaggccatgcacgtggtggccgaatcgggc
gtggcggcgcactggctctacaaggcggccgagccgaacgcggccagcaacgaccggctc
ggcaccaagtggctgcagtcgctgctcgacatccaggacgaaacccgcgacgccgccgag
ttctgggaccacgtcaaggtcgacctgttccccgacgcggtctacgtcttcacgccgaag
agccagatcctcgcgctgccgcgcggcgccacggtggtcgactttgcctatgccatccac
agcaacatcggcgaccacacctccgcggcgcgcatcaacggcgaccaggtgccgctgcga
acggagctcaagaacggggacgtggtcgaggtcatcaccgcgcccgtgtccacacccaat
cccgcgtggctcggcttcgtgcgaaccggccgggcgcgctccaagatccgccactacctg
aagaccctggcccatgccgaatccgaaggcctgggcgagaagctgctggcccaggcactg
cgcgccgaaggcctcagcaagctgccggccgaggacgccgagcaccaggcgctgtgggaa
aagctgctgcgcttcaccggcaaccgcacgcgcgccgagctgctgaccgacattggcctg
ggcaagcggattgccagcatcgtggcaaagcggctggtggccatgctgtccgaactcggc
gagcggcccgatgcgctgctgctgagccgcgagcgcttcatctcgcacgagaccatttcc
cagggcgccgtcacgctggatggcagcgagaactcgtcggtccgctttgcactgtgctgc
cggccgattccgggcgacgagatcgtgggctacctcggccatggcgaaggcctggtcgtg
cacaccgagtcctgcggcgtgggccagcgcctgcgccacaaggacagcgagcgtttcttc
gcggtcgaatgggcggacgagccgacccgcaccttcgaaaccggcgtggtcatcacggtg
cgcaacgacaagggcgtgctcgcgcgcgtggccgcgaccctggccgacgccgaagccgac
atcacgcacgtcgaaatggccgacgagacgccgcaggattcgaccgacctgcgcttcgtg
attgcggtgcgcgaccgcacccacctggacggcgtgctgcgcgccgcgcggcgcacggcc
tctgtgctgaccgccgcaaggacggttcccgcgccctga
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