Variovorax paradoxus S110: Vapar_4355
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Entry
Vapar_4355 CDS
T00916
Name
(GenBank) extracellular solute-binding protein family 5
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
vap
Variovorax paradoxus S110
Pathway
vap02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Vapar_4355
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vap02000
]
Vapar_4355
Transporters [BR:
vap02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Vapar_4355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ACS20966
UniProt:
C5CZ05
LinkDB
All DBs
Position
1:4600868..4602355
Genome browser
AA seq
495 aa
AA seq
DB search
MLNRRTLLATAGATVALASPIAGMAQGRKDAIVIGMALEPPGLDPTAGAAAAIAEVVHYN
ILETLTKINADGSVTPLLAESWEISPDLKTYTFKLRRGVKYQNGEPFNAAAVKFSFDRAG
GEKSTNKDKRTFANLSTQVVDDYTVVVINKEIDPDLPFVLGQATAVIVEPKSADGNATKP
VGTGPYKLDNWAKGSSITLSKWEGFRSPATARINKVTFRFISDTAAQAAALMAGDVDVFT
RIGTRAVPQFKMNPQFQVILAGSRAKTILSINNKKKPLDDVRVRRAILAAIDRKAVIEGA
ADGFGVPIGSHYVPGAAGYVDTTGINPFDLEKAKKLMAEAGVKTPLELTMTLPPPPYARQ
GGEVIVAQLAKIGITVKVQNVEWAQWLSGTYGNKDYDLSIVSHVEPFDLGNYAKPDYYWG
YQSKAFNALFDKIKATANAAERNKLLGEAQKMLAVDAANGFLYQPQFPTIAKKNVKGLWK
ENPIFVNDLSALSWG
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaccgtcgcaccctccttgccaccgccggcgccaccgtggcgctggcctctccc
atcgccggcatggcgcaggggcggaaggacgccatcgtgatcggcatggcgctcgagccg
ccgggcctggacccgaccgccggcgccgcggccgccatcgcggaagtggtgcactacaac
atcctggagacgctcaccaagatcaacgccgacggcagcgtcacgccgctcctggccgag
agctgggaaatctcgcccgacctgaagacctacaccttcaagctgcggcgcggcgtcaag
taccagaacggcgagcccttcaatgccgccgcggtgaaattctccttcgaccgcgccggc
ggcgagaagagcaccaacaaggacaagcgcaccttcgcgaacctgagcacgcaggtggtc
gacgactacaccgtggtggtcatcaacaaggaaatcgaccccgacctgcccttcgtgctg
ggccaggccacggccgtgatcgtcgagcccaagagcgccgacggcaacgccaccaagccg
gtcggcaccggcccctacaagctcgacaactgggccaagggctcgtcgatcacgctgagc
aagtgggagggcttccgcagcccggccacggccaggatcaacaaggtcaccttccgcttc
atttccgacacggccgcgcaggccgccgcgctgatggccggcgacgtcgacgtgttcacg
cgcatcggcacgcgcgcggtgccgcagttcaagatgaacccgcagttccaggtgatcctg
gccggctcgcgcgccaagaccattctgtcgatcaacaacaagaagaagccgctggacgac
gtgcgcgtgcgccgcgccatcctggcggccatcgaccgcaaggccgtgatcgaaggcgcg
gccgacggcttcggcgtgccgatcggcagccactacgtgccgggcgccgcaggctatgtc
gacaccacgggcatcaaccccttcgacctcgagaaggccaagaagctgatggccgaggcc
ggcgtgaagacgccgctcgaactcaccatgacgctgccgccgccgccctacgcacgccag
ggcggcgaggtgatcgtggcgcagctcgccaagatcggcatcacggtcaaggtgcagaac
gtggagtgggcgcagtggctcagcggcacctacggcaacaaggactacgacctgtcgatc
gtctcgcacgtcgagcccttcgacctcggcaactacgccaagcccgactactactggggc
taccagtcgaaggccttcaacgcgctgttcgacaagatcaaggcgacggccaatgcggcc
gagcgcaacaagctgctcggcgaagcgcagaagatgctggcggtcgatgcggccaacggc
ttcctctaccagccgcagttccccaccatcgcgaagaagaacgtgaagggcctctggaag
gagaacccgatcttcgtgaacgacctctcggcgctgtcatggggatga
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