Variovorax paradoxus S110: Vapar_4436
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Entry
Vapar_4436 CDS
T00916
Name
(GenBank) transcriptional regulator, IclR family
KO
K02624
IclR family transcriptional regulator, pca regulon regulatory protein
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vap03000
]
Vapar_4436
Transcription factors [BR:
vap03000
]
Prokaryotic type
Helix-turn-helix
IclR family
Vapar_4436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR
HTH_IclR
HTH_24
Motif
Other DBs
NCBI-ProteinID:
ACS21047
UniProt:
C5CJZ6
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All DBs
Position
1:4676090..4676875
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AA seq
261 aa
AA seq
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MATHTPQTETPAPGDSYVQSFARGLQVIRSFSESAPRQTLSEVAAASGLTRAGARRILLT
LQTLGYVVSDGKLFTLTPRILDLGFAYLSSMPIWNRAEPVMEALVQQVQESCSAAVLDAT
DIVYVMRVPTKKIMHISLGVGSRLPAYCTSLGRLLLADLDDEEVRARLEASDRQALTKHT
VTDVDALMAKVAQARRQQWCLVNQELEEGLISVAAPIVNRQGRMVAALNISGQANRTSAK
VMQETILPALREAADRISRLL
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggcaacccataccccgcaaacagagacgcccgcccccggcgacagctacgtgcagtcg
ttcgcgcgcgggctccaggtgatccgctcgttcagcgaaagcgcgccgcgccagacgctc
agcgaggtggcggccgccagcggactcacgcgggcgggcgcgcggcgcatcctgctcacg
ctgcagacgctgggctacgtggtgagcgacggcaagctcttcacgctcacgccgcgcatc
ctcgacctgggctttgcgtatctttcttcgatgccgatctggaaccgcgccgagcccgtg
atggaagcgctggtgcagcaggtgcaggagtcctgctcggccgcggtgctggacgccacc
gacatcgtctacgtgatgcgcgtgcccaccaagaagatcatgcacatcagcctgggcgtg
ggctcgcgcctgccggcctactgcacctcgcttggccggctgctgctggccgacctggac
gacgaagaggtgcgcgcgcggctcgaggcctccgatcgccaggcgctcaccaagcacacg
gtgaccgacgtggacgcgctcatggccaaggtggcgcaggcgcgcaggcagcagtggtgc
ctggtgaaccaggagctggaagaaggcctgatctccgtggccgcgcccatcgtcaaccgc
cagggccgcatggtggccgcgctgaacatcagcgggcaggccaatcgcaccagcgcgaag
gtgatgcaggagacgatattgccggcgctgcgcgaagcggcagaccggatttcgcgcttg
ctctga
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