Variovorax paradoxus S110: Vapar_4457
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Entry
Vapar_4457 CDS
T00916
Name
(GenBank) ABC transporter related
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
vap
Variovorax paradoxus S110
Pathway
vap02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Vapar_4457
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vap02000
]
Vapar_4457
02044 Secretion system [BR:
vap02044
]
Vapar_4457
Transporters [BR:
vap02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
Vapar_4457
Secretion system [BR:
vap02044
]
Type I secretion system
Adhesin protein transporter
Vapar_4457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
AAA_23
AAA_29
AAA_15
AAA_27
AAA_16
AAA_25
AAA_22
RsgA_GTPase
AAA_13
Motif
Other DBs
NCBI-ProteinID:
ACS21068
UniProt:
C5CK17
LinkDB
All DBs
Position
1:complement(4700057..4701898)
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AA seq
613 aa
AA seq
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MIKFLLPSQLVAEVPEKAGASPYAGALHTAFRAAYPLVKSAAWRSLPISLFGLLPSIFLL
QVYDRVLSRSGVSTLAALVCGILFFLCIEFWLRSGRSRLLRNAGAIIDHGVSGALLHSML
NRPLRALEARPASIWHQFFRDVASVRGTVTGGLAQSIFDLPMAVFALAVIGIVALPVLPV
VVLFLAIMVFLAWWWADEVRSGRVEEVQRGRGLERMTSEICNARETLKTQANDGPTIEMW
RQSYNSWLSESFSKNGQIETARDGTTVLMTVFSVIVVTVGAISVMEQWMTVGGLVASNML
ALKALQPVAGLVSSWRSLAAAKEAAKRLETVLGEPVEKAPTGMTLPQPLGRVTLKDVSFS
FTEDAHRPVLENVDLDIGPGGLHVIVGRNGAGKSTLVKLLSGLYTPTRGVISIGEYDLSQ
FGREELSRWISYLSQEVYWFGGPLIDTMRRTAPGQSDEQVVAACKLSGAHEFISRMPDGY
RTVVGEGGTGLSVGERRKLALAMSFLRKPSVLVLDEPSNDLDFQSERTLLATLLAVAKVR
TVVVVTHSLRIVSAASVVYHVTGQGNVEQGTAAVMVPKLFGVKKALVALPDSTAGEDDAD
VHSQQAAANRSMA
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagtttctcttgcccagccaactggtggccgaggtgcccgaaaaagcaggtgcg
agcccgtacgcgggtgccctgcacacggcgttccgcgccgcctacccactggtcaagagc
gcggcctggcgctcgctgcccatcagcctgttcggcctgctgccatcgatcttcctgctc
caggtgtatgaccgcgtgctgtcgcgcagcggcgtctccacgctggccgcgctggtgtgc
ggcatcctgttctttctttgcatcgagttctggctgcgctcggggcgttcgcgcctgttg
cgcaatgcgggcgccatcatcgaccacggcgtgtcgggcgcgctgctgcattcgatgctg
aaccgtccgctgcgtgcgctcgaagcgcgcccggcctcgatctggcaccagttcttccgc
gacgtggcctcggtgcgcggcaccgtcaccggcggcctggcgcaatcgatcttcgatctg
ccgatggcggtcttcgcactggccgtgatcggcatcgtggccttgccggtattgccggtg
gtggtgctgttccttgccatcatggtgttcctggcctggtggtgggccgacgaggtgcgc
agcgggcgggtcgaggaagtgcagcgcggccgcggcctcgagcgcatgacctcggagatc
tgcaacgcgcgcgaaacgctcaagacgcaggccaacgacggtcccaccatcgagatgtgg
cgccagtcgtacaactcctggctgagcgaaagcttcagcaagaacgggcagatcgaaacc
gcgcgcgacggcaccaccgtgctgatgacggtgttctcggtcatcgtggtcacggtgggc
gccatctcggtgatggagcaatggatgacggtgggcggcctggtcgcctccaacatgctg
gccctcaaggcgctgcagccggtggccggcctggtgtcgagctggcgctcgctggccgcg
gccaaggaagcggccaagcggctcgagacggtgcttggcgagccggtggaaaaagcgccc
accggcatgacgctgccgcagccgctgggccgcgtcaccttgaaggacgtgagcttcagc
ttcacggaagacgcgcaccggccggtgctggagaacgtcgacctggacatcgggccgggc
gggctgcacgtgatcgtcgggcgcaacggcgccggcaagtcgacgctggtcaagctgctc
tcgggcctgtacacgcccacgcgcggcgtcatcagcatcggcgagtacgacctttcgcaa
ttcggccgcgaagagctttcgcgctggatcagctacctctcgcaggaggtgtactggttc
ggcggaccgctgatcgacaccatgcgccgcacggccccgggccagagcgacgagcaggtg
gtggcggcctgcaagctctcgggcgcgcacgagttcatttcgcgcatgcccgacggctac
cgcaccgtggtgggcgagggcggcacgggcctgtcggtgggcgagcggcgcaagctcgcg
ctggccatgagcttcctgcgcaagccctcggtgctggtgctcgacgagcccagcaacgac
ctggacttccagagcgagcgcaccctgctggccacgctgctcgcggtggccaaggtgcgc
acggtggtggtggtcacgcattcgcttcgcatcgtgtccgcagccagcgtggtctaccac
gtgacggggcagggcaacgtcgaacagggcacggccgccgtcatggtgcccaagctcttc
ggcgtgaagaaggcgctggtggcgctccccgattccaccgcgggcgaggacgatgccgac
gtgcactcgcagcaagccgccgccaaccgttccatggcctga
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