Variovorax paradoxus S110: Vapar_4481
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Entry
Vapar_4481 CDS
T00916
Name
(GenBank) succinyl-CoA synthetase, alpha subunit
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00020
Citrate cycle (TCA cycle)
vap00640
Propanoate metabolism
vap00660
C5-Branched dibasic acid metabolism
vap00720
Other carbon fixation pathways
vap01100
Metabolic pathways
vap01110
Biosynthesis of secondary metabolites
vap01120
Microbial metabolism in diverse environments
vap01200
Carbon metabolism
Module
vap_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vap_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Vapar_4481
00640 Propanoate metabolism
Vapar_4481
00660 C5-Branched dibasic acid metabolism
Vapar_4481
09102 Energy metabolism
00720 Other carbon fixation pathways
Vapar_4481
Enzymes [BR:
vap01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
Vapar_4481
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Gp5_OB
Motif
Other DBs
NCBI-ProteinID:
ACS21092
UniProt:
C5CK41
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All DBs
Position
1:complement(4730095..4730994)
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AA seq
299 aa
AA seq
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MSILINKHTRVITQGITGKTGQFHTAMCRDYANGQKCFVAGVNPNKAGKSFDGIPVFGTV
KEAKAETGATVSVIYVPPPFAAAAIDEAVDAGLDLVVCITEGIPVRDMIRTRHRMEGSKT
LLLGPNCPGLITPEEIKIGIMPGHIHQKGRIGVVSRSGTLTYEAASQLASFGIGQSTVVG
IGGDPVGGLRHIDVLKMFNDDPRTDAVIMVGEIGGSDEETCARWISEHMRKPVVGFIAGA
SAPPGKRMGHAGAIVSGGKGTAREKLAVMKECGIHVTDNPAEMGKLLASLVIPDYLPFD
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcctcatcaacaagcacacccgcgtcatcacccagggcatcacgggaaagacc
ggccagttccacaccgcgatgtgccgtgactacgccaacggccagaagtgcttcgtcgcc
ggcgtgaaccccaacaaggcgggcaagtccttcgacggcattccggtgttcggcaccgtc
aaggaagccaaggccgagaccggcgccaccgtctccgtgatctacgtgccgccgccgttt
gccgccgcggccatcgacgaggcggtggatgcggggctcgacctcgtcgtgtgcatcacc
gaaggcattccggtgcgcgacatgatccgcacccgccatcgcatggaaggcagcaagacc
ctgctgctcggccccaactgcccgggcctcatcacgcccgaggaaatcaagatcgggatc
atgcccggccacatccaccagaagggccgcatcggcgtggtctcgcgctcgggcaccttg
acctacgaggccgcgagccagctcgcgagcttcggcatcgggcagtcgaccgtggtgggc
atcggcggcgatccggtgggcgggctgcggcacatcgacgtgctgaagatgttcaacgac
gacccgcgcaccgacgccgtgatcatggtcggcgagatcggcggcagcgacgaagaaacc
tgcgcgcgctggatcagcgagcacatgcgaaagccggtcgtcggcttcatcgccggcgcc
agcgcgccaccgggcaagcgcatgggccacgcgggcgccatcgtctcgggcggcaaggga
acggcgcgggaaaaactggcggtgatgaaggaatgcggcatccacgtgaccgacaacccg
gccgagatgggaaagctgctcgcgtcgctggtgatccccgactacctgcccttcgactga
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