Variovorax paradoxus S110: Vapar_4579
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Entry
Vapar_4579 CDS
T00916
Name
(GenBank) SMC domain protein
Organism
vap
Variovorax paradoxus S110
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_27
AAA_23
SMC_N
AAA_15
AAA_29
ATPase_2
DNA_pol_A_exoN
Motif
Other DBs
NCBI-ProteinID:
ACS21185
UniProt:
C5CL34
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Position
1:complement(4839143..4842682)
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AA seq
1179 aa
AA seq
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MKLSSLHLKAFGPFADHVVDLGGPGKSLVLIYGPNEAGKSAMLRAIEALRYQIDPRSPDN
FRHEHPDMSVGATLLKPDGTTATVMRIKRPKDSLRVARALGGGLLETTEALASSGIQEAL
TAGLGQEEYRRMFGLNHETLRAGGQRLARGEVELGTSLFEASLGVRDITAIAQDLDNRAR
ELFMPGARGTKGKINEALKRHKELQREVKDATVKPRDWQDRFNASERARQDVQRLDAEQR
ALNSRQRLLATLRAAAPAIQELDEAQATLTEMKETPDLVEGAGQARTAAEASLLAAQEAL
ATARAMAQDAESRLDALAPDPAAIAHRAAIGRLIAKAEDVDTLRRSIAQLEKQHTAQVSE
VRQMAAAINASANSEQVLARAPAKARGAEVEQRVQAFVGAEQALDNHTQSAPKVQEEASV
ETEGMPPEAAIRQVRTVLSDLERGRNILSRLRDLPAEIAETKRALDDQLHDLGLEGEGAL
DSVRPVLDADIDAAAQRLQDNASAQQKLRDRLTQIEPELRSARATRDRMRGDQAVITLDD
VVQARGHRDHRWLLVRATYVDNGEHCDRAVDQAAATASADGSTLPEVYEQAVRLADERAD
GYARDTKAAAELKAKEEEIARYERDEQALRDELAQLQAQGRALSQAWIQQLQAHGLFEHA
PLALREWQGLLKQAREGRAALQRLRNEQQQALEVETRLASALRAALQAIDPGSAPGPEPI
TSLETLVREQEASIQRRQRVGDDSRARQALLATQARQWEERKAELDRKLTDARTRMNEIA
QEWLLPLDVSPLAIRARIQEFTGLRDAQARADDLQGKLEQANASLAQIFADSHAVAPALG
LQAPHEAQALRPWFDQLEQRRICSDEVQTKRQAAQRDLSNADTAVRTQETLIAKYEIQLR
GMCEAAGVADVRLLPGVELQAERKRQASTATQRCLQQLRVASNLTLEELREQLAAQDGAA
LLAQEEQCVRNLEEVAPKLEAARVDAERTRRELEAVDASGAAAQAQEDLCQATASIESSL
RPWMRLRLAHSLLMQAQRRFQERAQGPMLERASGYFQRMTGGAFTRLKADVLADKQVLLA
ERAQGGAIGTEAMSEGTRDQLYLALRLAAVSLRRDAGVNLPMVLDDVLMTSSDGRAGFVL
QALSDFSQGSQVVVFTHHEHLLEVARRAVPSDVLQVAGL
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgaaactatcgtctttgcatctgaaagccttcggccctttcgctgaccatgtggtcgac
ttgggcggtcccggcaagagtctggtcttgatttatggcccaaatgaggccggcaagtcg
gcgatgctgcgcgcgatcgaggcgctgcgctaccagatcgacccgcgttctccggacaat
ttccgtcacgaacaccccgacatgagcgtgggtgcgactctcctcaaacctgatggtacg
accgccacggtgatgcggatcaaacgtccaaaggactcgctacgcgtcgcacgcgccttg
ggcggtggtctgctggaaacgaccgaagcgcttgcatcatcagggattcaggaggcgctc
actgcaggccttggtcaagaagagtaccgacgtatgttcgggttgaaccacgagacactg
cgcgcaggggggcagcggcttgctcgaggagaggtggagctcggaacgtccttgttcgaa
gcgagcttgggcgtacgggacataaccgccatcgcccaggacctggacaaccgtgcacgc
gaactctttatgcctggagcgcgcggcaccaagggaaagatcaatgaggcgctcaagcgc
cataaggaactgcagcgcgaggttaaggatgcgacggtcaaaccgcgcgactggcaagat
aggttcaatgcgagcgagcgtgcacgtcaggatgtccagcgattggacgcagagcagcgc
gcactgaattctcggcaaaggctgctcgcaaccttgcgtgctgcggcaccggcaatccag
gagctggacgaggcgcaggcaacgctgactgaaatgaaggagacgcccgatttggtggag
ggggcaggtcaggcgcgcaccgcggcggaggctagcctgctggcggcacaggaagcgctc
gcaaccgctcgggcaatggcccaagatgctgagtctcggctggacgcactggcgccggat
ccggccgcgatcgcgcaccgcgccgcgatcggccgcctgatcgctaaagccgaagatgtg
gatactctgcgtcgttcgatcgcgcagttggaaaagcagcacactgcgcaagtgagcgag
gtcagacagatggccgcggccatcaatgccagcgccaattcggagcaggtgctggctcgg
gcgccggccaaggcgcgcggcgcggaggtcgagcagcgagtgcaggcattcgtgggcgcc
gagcaggcactcgacaaccacacccaatccgctcccaaggtgcaggaggaggcctccgtc
gagacggaaggcatgccgccggaagcggccatccggcaagtgcgcaccgtgctttctgac
ctggagcgcggacgcaacatcttgtcgcgcctgcgtgaccttccggctgaaattgcagaa
actaagcgggcgcttgacgatcagttgcacgacttgggtctggagggagagggagctttg
gactcggtgaggccggtgctggacgccgacatcgacgctgcggcgcagcgccttcaggac
aacgcatctgcgcaacaaaagctacgcgatcgcctgacgcagatcgagccagagctgcgc
agtgctcgcgccacccgggaccgcatgcgcggggatcaggcggtgataacgctggatgac
gtggtgcaagcccgtggccatcgcgaccaccgctggctgctcgtgcgtgctacctacgtc
gacaatggggagcattgcgatagggctgtcgatcaggcggctgcaaccgcctctgcagac
ggaagcacgttgcccgaggtgtacgagcaggcggttcgcttggcagatgaacgcgccgat
gggtacgcgcgcgacacgaaggctgcggcggagttgaaggccaaggaggaagaaatcgca
cgctatgagcgcgatgagcaggctctcagggatgaactggcccaactgcaggcgcagggt
agggcactttcccaagcctggatccaacagcttcaggcacacggtctgttcgagcacgct
ccgttggcgcttcgtgaatggcaaggtcttctcaagcaggcgcgcgaggggcgggcggct
ctacaacggctgcgcaatgaacagcagcaggcgctcgaagtggaaacgcgcctggcctct
gcgttgcgtgccgcgctgcaggcgatcgatccgggatcggcgccggggccagagccgatt
accagtctggagacgttagtccgtgagcaggaggccagcatacagcgtcggcaacgagtt
ggtgatgacagtcgcgcacgccaggcgttgctcgcaacgcaggcgcgacagtgggaggag
cggaaggccgaactcgatcggaagctaaccgatgcccgtacccgcatgaatgagattgcg
caggagtggttgctgcccttggacgtatcgcctttggcgatccgcgcgcgtattcaggag
ttcactggcttgcgagacgcacaggcgagggctgatgatctccaagggaaacttgagcag
gccaatgcgagcctggcacaaatcttcgctgactctcatgcggtagcgccggcgctgggc
ctgcaagcaccccatgaagcgcaggcgttgcgcccttggttcgatcagctggagcagcgc
cgtatttgttccgatgaggtgcagacaaagcggcaggcagcgcagcgcgatctgtccaat
gcggatactgctgtacgcactcaagagacattgatcgccaaatacgagatccagctgcgc
ggtatgtgcgaagccgccggtgtggcagacgtgcggctgttgcccggtgtcgaactccag
gcggagcgaaagcgccaggcgtcgactgcaacgcagcgctgtctgcagcagttacgcgtc
gcttcaaacctgacgctggaagaactacgagagcagttggccgcgcaagacggcgcggcg
ctcctggcgcaggaagaacagtgcgtcaggaatcttgaggaggtcgcgcccaagctggag
gctgcgcgcgtagatgccgagcggacccgacgcgaattggaggcggtcgacgcttcggga
gcggcagcgcaggcgcaggaagatctgtgtcaagccacagcaagcatagagtcgagcctg
cgtccatggatgcgattgcgtctggcacatagcttgttgatgcaggcccagcgtagattc
caagagcgcgcgcaagggcctatgttggaacgcgcgagcgggtacttccagcgaatgact
ggtggagcgttcactcgattaaaggccgatgtcctggcggacaaacaggtgctgctggcg
gagcgcgcgcagggcggcgccatcggcaccgaagctatgagcgaaggcacgcgggatcag
ctgtatttggcgcttcgcttggctgcggtcagcctgcggcgcgatgcaggggtgaatctg
ccgatggtgctggacgatgtactcatgacctccagcgatggccgtgccggctttgtgctg
caggcactgtcggacttctcgcaaggcagccaggtagttgtatttacccaccatgagcac
ttgctggaagtcgcgcgccgcgcggttccctcagatgtgctgcaggtcgccggcctttag
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