Variovorax paradoxus S110: Vapar_4636
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Entry
Vapar_4636 CDS
T00916
Name
(GenBank) periplasmic binding protein/LacI transcriptional regulator
KO
K10439
ribose transport system substrate-binding protein
Organism
vap
Variovorax paradoxus S110
Pathway
vap02010
ABC transporters
vap02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Vapar_4636
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Vapar_4636
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vap02000
]
Vapar_4636
Transporters [BR:
vap02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
Vapar_4636
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
ACS21241
UniProt:
C5CL90
LinkDB
All DBs
Position
1:4926105..4927061
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AA seq
318 aa
AA seq
DB search
MKFTRRTLQSAAALALLGAFAASPALAQDKPKVALVMKSLANEFFRTMEDGAKAHQKAHA
SEYTLVANGIKDETDTAAQIKMVEQMMAQKINALVIAPADSKALVPVVKAAIDKGILVVN
IDNQFDAAALKEKGIQVPFVGPDNRAGAKLVGDELAKSLKAGDKVGIIEGVSTTFNAQQR
TLGYQDAMKAAGATVVGVQSGQWEIDKGNTVAAGMMREHPDLKALLAGNDSMALGAVAAV
KAAGKTGKVLVVGYDNIGAIKPMLKDGRVLATADQFAAKQAVFGIETALKALAEKKPQSS
MPAEVKTDVVLVTKTSAK
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcacccgccgcacgctgcaaagcgcagccgccctggcgctgctgggcgctttc
gccgcctcgcccgccctggcccaggacaagcccaaggtcgcgctggtcatgaagtcgctg
gccaacgaattcttccgcaccatggaagacggcgccaaggcgcaccagaaggcgcatgcc
tcggagtacaccctggtggccaacggcatcaaggacgagaccgacacggccgcccagatc
aagatggtcgagcagatgatggcgcagaagattaatgcgctggtcatcgcgccggccgat
tcgaaggcactggtgccggtggtcaaggcggccatcgacaagggcattctcgtggtcaac
atcgacaaccagttcgacgccgccgcgctgaaggaaaagggcatccaggtgcccttcgtc
ggccccgacaaccgcgccggcgccaagctggtgggcgacgagctcgccaagagcctgaag
gccggcgacaaggtcggcatcatcgaaggcgtgtcgaccaccttcaatgcgcagcagcgc
accctcggctaccaggacgccatgaaggccgccggcgccacggtggtgggcgtgcagtcg
ggccagtgggaaatcgacaagggcaacacggtggccgccggcatgatgcgcgagcacccc
gacctgaaggcgctgctcgcgggcaacgacagcatggcgctgggcgccgtggcggccgtc
aaggccgcgggcaagaccggcaaggtgctggtggtgggctacgacaacatcggcgccatc
aagccgatgctgaaggacggccgcgtgcttgccaccgctgaccagttcgcggccaagcag
gcggtgttcggcatcgagaccgcgctcaaggcgctggccgagaagaagccgcagtcgagc
atgccggccgaagtgaagaccgacgtggtgctggtcaccaagacttccgcaaagtaa
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