Variovorax paradoxus S110: Vapar_4671
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Entry
Vapar_4671 CDS
T00916
Name
(GenBank) OmpA/MotB domain protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vap02000
]
Vapar_4671
Transporters [BR:
vap02000
]
Other transporters
Pores ion channels [TC:
1
]
Vapar_4671
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
Motif
Other DBs
NCBI-ProteinID:
ACS21276
UniProt:
C5CM17
LinkDB
All DBs
Position
1:4960236..4960853
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AA seq
205 aa
AA seq
DB search
MRKMTTDRAFLLAATLATALLAACSTPGTRVVLLPQADDKPSAVIVRAKDGEEVLSKPYQ
RATAAVGASGAPVVDQADPAKVQADHKILFDMRPPAPQRYTVYFEVGGTTLTPASQQVMN
EALMAAQSRSGSDIVVTGHTDTKGALEQNDMLSQRRAQEVAQLFVERQFPAKRIEAVGRG
ERELAVPTADEVDEPRNRRVTIEVR
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagatgacgacggaccgggcctttcttcttgctgccacgctggccactgcgctg
ctggccgcatgctcgacgccgggcacccgcgtggtgctgctgccccaggcggatgacaag
ccttctgccgtgatcgtgcgcgcaaaggacggcgaggaagttctttccaagccctatcag
cgggcaaccgctgcggtaggcgcctccggcgcgccggtggtcgaccaggccgacccggcc
aaggtgcaggcggaccacaagatcctgttcgacatgcggccgcccgcgccgcagcgctac
acggtgtatttcgaagtgggcggcaccacgctcacgcctgcgtcgcagcaggtcatgaac
gaagcgctgatggccgcacaaagccgcagcggcagcgacatcgtggtgaccgggcacacc
gacaccaagggcgcgctcgagcagaacgacatgctctcgcagcggcgcgcgcaggaagtg
gcgcagcttttcgtggaacggcagttcccggccaagcgcatcgaggccgtgggccgcggc
gagcgcgaactcgcggtacccaccgccgacgaggtggacgagccgcgcaaccggcgcgtc
acgatcgaagtccgctga
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