Variovorax paradoxus S110: Vapar_4719
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Entry
Vapar_4719 CDS
T00916
Name
(GenBank) Carbamoyl-phosphate synthase L chain ATP-binding
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00280
Valine, leucine and isoleucine degradation
vap01100
Metabolic pathways
Module
vap_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Vapar_4719
Enzymes [BR:
vap01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
Vapar_4719
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
BT_MCC_alpha
ATP-grasp
Biotin_lipoyl_2
Dala_Dala_lig_C
HlyD_3
HlyD_D23
LAL_C2
GCV_H
RnfC_N
NQRA_N
ATP-grasp_4
ATP-grasp_3
PTS_EIIA_1
GARS_A
DUF2118
ATPgrasp_ST
Motif
Other DBs
NCBI-ProteinID:
ACS21324
UniProt:
C5CM65
LinkDB
All DBs
Position
1:complement(5012707..5014710)
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AA seq
667 aa
AA seq
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MFKKILIANRGEIACRVAATARRMAIRTVAVYSDADAHANHVRACDESVHLGGSAPKDSY
LRWEKILEAAKATGAEAVHPGYGFLSENEEFAQACADAGLVFIGPPPSAIKAMGLKAESK
QLMEKAGVPLVPGYHGHDQGPALLQREADRIGYPVLIKASAGGGGKGMRAVDKAEDFAAA
LASCQREAINSFGDDAVLIEKYVQRPRHIEIQVFGDTHGNYVYLFERDCSVQRRHQKVLE
EAPAPGMTEAMRKQMGEAAVAAARAVNYVGAGTVEFIVEQREGGEMNFFFMEMNTRLQVE
HPVTEAITGLDLVEWQLRVASGEALPAKQQELQIHGHAIEARICAENPDNNFLPATGSLR
VYRKPQATAFQRSRVRIDDGVREGGEISPFYDSMIAKLIVHGSTRDEALARLDAALAQVQ
IVGVSTNVQFLRGILATESFAKANLDTALIERERAVLFDREALGLPLAAAAAITRTLVTE
RPVGAHYPFERRDGWRSHGEYRRHFDFEFRGAEQTAVLSYRRDGSLWLEAGGVEGPLVVG
QFPTGEFEVEFAGMRQTVDVHLDGATAHVFASKGATKITAIDRLAHAGDTHAEAGRLTAP
MPGKVVSFAVKAGDKVSRGQPLAVMEAMKMEHTIAAPADGTVEELMFSPGEQVAEGDELL
RMAAAAV
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagaagatcctcattgccaaccgaggcgagatcgcctgccgtgtcgcggccact
gcccgccgcatggcgattcgcaccgtggccgtgtactccgatgccgacgcgcatgccaac
cacgtgcgcgcctgcgacgagtcggtgcacctcggcggcagcgcaccgaaagacagctac
ctgcgctgggaaaagatcctcgaagccgccaaggccacgggcgccgaagccgtgcatccc
ggctacggcttcctgagcgagaacgaggagttcgcacaggcctgcgccgacgcgggcctg
gtcttcatcggcccgccgccttcggccatcaaggcgatgggcctgaaggccgagtcgaag
cagctgatggaaaaggccggcgtgccgctggtgcccggctaccacggccacgaccagggc
ccggcgctgctgcagcgcgaggccgaccgcatcggctacccggtgctcatcaaggccagt
gcgggcggcggcggcaagggcatgcgcgcggtcgacaaggcggaagactttgccgcggcg
ctcgcctcgtgccagcgcgaggcgatcaacagcttcggcgacgacgcggtgctgatcgag
aagtacgtgcagcggccgcgccacatcgagatccaggtgttcggcgacacgcacggcaac
tacgtctacctgttcgagcgcgactgctcggtgcagcggcggcaccagaaggtgctggaa
gaggcgcccgcgcccggcatgaccgaggcgatgcgcaagcagatgggcgaggcggccgtg
gcggcagcgcgtgcggtgaactacgtcggcgccggcacggtggaattcatcgtcgagcag
cgcgaaggcggcgagatgaatttcttcttcatggagatgaatacccgcctgcaggtggag
catccggtgaccgaagcgatcaccggcctcgacctcgtcgaatggcaactgcgcgtggcc
tcgggcgaggcgctgcccgcaaagcagcaggagctgcagatccacggccacgcgatcgag
gcgcgcatctgcgccgagaaccccgacaacaacttcctgcctgcgacaggcagcttgcgc
gtctaccgcaagccgcaagcgacggccttccagcgcagccgcgtgcgcatcgacgacggc
gtgcgcgagggcggcgagatctctccgttctacgactcgatgatcgccaagctgatcgtg
cacggcagcacgcgcgacgaggcgctggcgcggctcgacgcggcactcgcgcaggtgcag
atcgtcggtgtgtcgaccaatgttcagttcctgcgcggcattctcgcgaccgagtcgttc
gccaaggccaacctcgacaccgcgctgatcgagcgcgagcgcgccgtgctgttcgaccgc
gaggcgctgggcctgccgctggccgccgccgccgccatcacgcgcacgctggtcaccgag
cggccggtgggcgcgcactaccctttcgagcggcgcgacggctggcgctcgcatggcgag
taccggcgccacttcgacttcgaattccgtggtgccgagcagacggccgtgctgagctac
aggcgcgacggcagcctgtggctcgaagccggcggcgttgaaggcccgctggtcgtgggc
cagttcccgacgggcgagttcgaggtcgagtttgccggtatgcggcagaccgtggacgtg
cacctggacggcgccacggcccatgtgttcgcgtcgaagggcgccacgaagatcacggcc
atcgaccgcctggcccatgccggcgacacccatgccgaagccggccgcctcaccgcgccg
atgcccggcaaggtcgtgtccttcgcggtcaaggccggcgacaaggtcagccgcggccag
ccgctcgcggtgatggaggccatgaagatggagcacaccatcgcggcgccggccgacggc
acggtggaagaactgatgttctcgcccggcgagcaggtggccgagggcgacgagctgctg
cggatggctgcggcggcggtttaa
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