Variovorax paradoxus S110: Vapar_4749
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Entry
Vapar_4749 CDS
T00916
Name
(GenBank) transcriptional regulator, TetR family
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vap03000
]
Vapar_4749
Transcription factors [BR:
vap03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
Vapar_4749
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_C_3
TetR_N
TetR_C_21
TetR_C_29
HAC6_helical
Motif
Other DBs
NCBI-ProteinID:
ACS21354
LinkDB
All DBs
Position
1:5047714..5048397
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AA seq
227 aa
AA seq
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MNADPAALSPSTAQEMPAPDGPLSRARPGRERIMAAIRTAAVAEFSLHGLKGTSTQAIAA
RAGLTKPQLHYYIAGKEELYEELLMQVLHAWKVVFSFEDASDPATVLGDYIRKKLDHAFD
NPEISRIFTREVLDGGRNLDRYWPNAQAWTQKKVDIINGWIARGQMRPLDARLLLMHIWA
MTQSYADYAIQTRVMLGLPPDAPIDREPIARELVAFVLGGCGIGSQA
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgatcccgccgccctgtcccccagcaccgcccaggaaatgcccgcccccgac
ggcccgctgtcgcgcgcgcggccggggcgcgaacgcatcatggcggcgatccgcaccgcg
gccgtggccgagttcagcctgcatggcctcaagggcacctccacccaggccattgccgca
cgcgccggcctcaccaagccccaactgcactactacatcgccggcaaggaagagctctac
gaagagctgctgatgcaggtgctgcatgcctggaaggtggtgttctcgttcgaggacgcc
agcgacccggccaccgtgctgggcgactacatccgcaagaagctcgaccacgcgttcgac
aaccccgagatctcgcgcatcttcacgcgcgaagtgctcgacggcggccgcaacctcgac
cgctactggcccaacgcgcaggcctggacgcagaagaaggtcgacatcatcaacggctgg
atcgcgcgcgggcagatgcgtccgctcgatgcgcgcctgctcctgatgcacatctgggcc
atgacccagagctacgccgactacgcgatccagacgcgcgtgatgctcggcctgccgccc
gatgcgccgatcgaccgcgagccgatcgcgcgcgagctggtggccttcgtgctgggcggc
tgcggcatcggcagccaagcctag
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