Variovorax paradoxus S110: Vapar_4819
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Entry
Vapar_4819 CDS
T00916
Name
(GenBank) Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vap03009
]
Vapar_4819
Enzymes [BR:
vap01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
Vapar_4819
Ribosome biogenesis [BR:
vap03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Vapar_4819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
RsmI_C
Motif
Other DBs
NCBI-ProteinID:
ACS21424
UniProt:
C5CN61
LinkDB
All DBs
Position
1:5137182..5138138
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AA seq
318 aa
AA seq
DB search
MASLAPASFGAALSAARDASGAQHYPQGTLYVVATPIGNLADITLRALHVLQLVDAVACE
DTRHTQSLLRAYGIDRPNAQLLAVHQHNEAEAAQAVVARLAQGERIAYVSDAGTPGVSDP
GARLVAAVRGAGQRVLPLPGASSVTTLVGAAGLVAAGDESSAFVFAGFLPTKAGERDAAV
QALAQERRAVVLLEAPHRIEAVARALATLGERRITVGRELTKQFEEIATVAAAELPGWFA
AGRDRTRGEFALVLHPMAAAADDGAEGERVLRLLLAELPVKTAVRLAAEISGAPRNALYE
AALRIRNDDGNEDDESGA
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
ttggcttcactagcacccgcttccttcggcgccgccctttcggccgcgcgcgatgcctcg
ggtgcacagcattatccgcagggcacgctctacgtggtggccacgcccatcggcaacctg
gccgacatcacgctgcgcgcgctgcacgtgctgcagctggtcgatgcggtcgcctgcgag
gacacgcgccacacgcagagcctgctgcgcgcctacggcatcgaccggccgaatgcccag
ctcctggccgtgcaccagcacaacgaggccgaggccgcgcaggccgtggtcgcgcggctc
gcgcagggcgagcgcatcgcttacgtgagcgatgccggcacgcccggcgtgagcgacccg
ggcgcgcggctggtcgcagccgtgcgcggtgccggccagcgcgtgctgccgctgccgggc
gcgagcagcgtcaccacgctggtcggcgccgccggcctggtggcggccggcgacgagagc
agcgccttcgtgttcgcgggcttcctgccgaccaaggccggcgagcgcgacgcggccgtg
caggcgctcgcacaggagcggcgcgccgtggtactgctggaagcgccgcaccgcatcgaa
gccgtggcccgcgcgctggcgacgctgggcgagcgccgcatcaccgtcggccgcgagctc
accaagcagttcgaggagatcgcgaccgtcgccgccgccgagctgccgggctggttcgca
gccggccgcgaccgcacgcgcggcgaattcgcgctggtgctgcaccccatggccgcggcc
gccgacgacggcgccgaaggcgaacgcgtgctgcgcctgctgctggccgagctgcccgtg
aagactgctgtgcggcttgcggccgagatcagcggggcgccgcgcaatgcgctgtatgaa
gcggcgctgcgcattcgcaacgacgacggcaacgaagacgacgagagcggcgcgtag
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