Variovorax paradoxus S110: Vapar_4864
Help
Entry
Vapar_4864 CDS
T00916
Name
(GenBank) ABC sugar transporter, periplasmic ligand binding protein
KO
K10439
ribose transport system substrate-binding protein
Organism
vap
Variovorax paradoxus S110
Pathway
vap02010
ABC transporters
vap02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Vapar_4864
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Vapar_4864
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vap02000
]
Vapar_4864
Transporters [BR:
vap02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
Vapar_4864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
ACS21468
UniProt:
C5CNA5
LinkDB
All DBs
Position
1:complement(5183059..5184024)
Genome browser
AA seq
321 aa
AA seq
DB search
MTSFFTRRIALTAVAAAALSSLPAFAAEKVNLGVSIPAATHSFMGGINYWANQAKKDLEK
EHKDLKITIKTAANAPEQANQLQDLSTVTKINALVVFPFESAALTKPVAQVKAKGAYVTV
VDRGLTDTSAQDAYVAGDNTAFGRIPAEYIAKQLGGKGNVVALRGIATTLDNERMDAFNA
VLKNYPDIKLLDAKYANWNRDDAFKVTQDYLTRFKNIDAIWAADDDMAVGVLKAIEQAKR
DDIKIIFGGAGAKGMVKTIMDGKDKRIGADVSYSPKFIYDAIKLTAEARLKGEKLPATTI
IPSVLITKENAKDFYHPNSPF
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgacaagcttcttcacacgtcgcatcgcactcacggccgtggcggccgcggcgctttcg
agcctgcccgcattcgcggccgagaaagtgaacctcggcgtctcgattccggcggccacg
cacagcttcatgggcggcatcaactactgggccaaccaggcgaagaaggacctggagaag
gaacacaaggacctgaagatcacgatcaagaccgcggccaacgcgcccgagcaggcgaac
cagctgcaagacctgtcgaccgtcaccaagatcaatgcgctggtggtgtttccgttcgag
tcggccgcgctgaccaagccggtggcgcaggtcaaggccaagggcgcctacgtgaccgtg
gtcgaccgcggcctcaccgataccagcgcgcaggacgcctacgtggccggcgacaacacc
gccttcggccgcattccggccgagtacatcgccaagcagctcggcggcaagggcaacgtg
gtggcgctgcgcggcattgcgaccacgctggacaacgagcgcatggatgccttcaacgcg
gtgctcaagaactatccggacatcaagctgctcgacgccaagtacgccaactggaaccgc
gacgacgccttcaaggtcacgcaggactacctcacgcgcttcaagaacatcgacgccatc
tgggccgccgacgacgacatggccgtgggcgtgctcaaggccatcgagcaggccaagcgc
gacgacatcaagatcatcttcggcggcgcgggcgccaagggcatggtcaagaccatcatg
gacggcaaggacaagcgcatcggcgccgacgtgagctactcgcccaagttcatctacgac
gcgatcaagctcacggccgaggcgcggctcaagggcgagaagctgcctgcgaccacgatc
attccttcggtgctgatcaccaaggaaaacgccaaggacttctaccacccgaactcgccg
ttctga
DBGET
integrated database retrieval system
