Variovorax paradoxus S110: Vapar_4917
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Entry
Vapar_4917 CDS
T00916
Name
(GenBank) translation elongation factor Tu
KO
K02358
elongation factor Tu
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
vap03012
]
Vapar_4917
03029 Mitochondrial biogenesis [BR:
vap03029
]
Vapar_4917
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vap04147
]
Vapar_4917
Translation factors [BR:
vap03012
]
Eukaryotic type
Elongation factors
Vapar_4917
Prokaryotic type
Vapar_4917
Mitochondrial biogenesis [BR:
vap03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
Vapar_4917
Exosome [BR:
vap04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Vapar_4917
Exosomal proteins of breast cancer cells
Vapar_4917
Exosomal proteins of colorectal cancer cells
Vapar_4917
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
RsgA_GTPase
cobW
Motif
Other DBs
NCBI-ProteinID:
ACS21521
UniProt:
C5CKE6
LinkDB
All DBs
Position
1:complement(5225679..5226872)
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AA seq
397 aa
AA seq
DB search
MAKGKFTRTKPHVNVGTIGHVDHGKTTLTAAIATVLSAKFGGEAKAYDQIDAAPEEKARG
ITINTAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHI
LLARQVGVGYIIVFLNKCDMVDDAELLELVEMEVRELLDKYEFPGDDTPIIHGSAKLALE
GDKGKLGEEAIMKLAEALDTYIPTPERAVDGTFLMPVEDVFSISGRGTVVTGAVERGVIK
VGEEIEIVGIRPTVKTTCTGVEMFRKLLDQGQAGDNVGVLLRGTKREEVERGQVLCKPGS
IKPHTHFTAEVYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTGAIELPKDKEMVMPGDNVS
ITVKLINPIAMEEGLRFAIREGGRTVGSGVVAKILDI
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaggtaaattcacccgcaccaagccgcacgtgaacgtgggcacgatcggtcac
gttgaccacggcaagaccacgctgacggcggccatcgccacggtgctgtcggccaagttc
ggcggcgaagccaaggcctacgaccagatcgacgcggcgcccgaagaaaaggcccgcggc
atcaccatcaacaccgcccacgtcgagtacgagacggccaaccgccactacgcccacgtc
gactgccccggccacgccgactacgtcaagaacatgatcaccggcgcggcccagatggac
ggcgccatcctcgtgtgctcggccgccgacggccccatgccccagacccgcgagcacatc
ctgctggcgcgccaggtgggtgtgggctacatcatcgtgttcctgaacaagtgcgacatg
gtggacgacgccgaactgctcgagctcgtcgaaatggaagtgcgcgaactgctggacaag
tacgaattcccgggcgacgacacccccatcatccacggctcggccaagctcgccctggaa
ggcgacaagggcaagctcggcgaagaagccatcatgaagctggccgaagcgctggacacc
tacatcccgacgcccgagcgcgccgtggacggcaccttcctgatgcccgtggaagacgtg
ttctcgatctccggccgcggcaccgtggtgaccggcgccgtcgagcgcggcgtgatcaag
gtcggcgaggaaatcgagatcgtgggcatccgcccgaccgtcaagaccacctgcaccggc
gtggaaatgttccgcaagctgctggaccagggccaggcgggcgacaacgtcggcgtgctg
ctgcgcggcaccaagcgcgaagaagtcgagcgcggccaggtgctgtgcaagcccggctcg
atcaagccgcacacgcacttcaccgccgaggtgtacgtgctgtccaaggacgaaggtggc
cgtcacacgccgttcttcaacaactaccgtccgcagttctacttccgcacgacggacgtg
accggcgcgatcgagctgcccaaggacaaggaaatggtcatgcctggcgacaacgtcagc
atcaccgtgaagctgatcaacccgatcgcgatggaagagggcctgcgcttcgccatccgc
gaaggcggccgcaccgtgggttcgggcgtcgtggcaaagatcctcgacatctaa
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