Variovorax paradoxus S110: Vapar_5005
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Entry
Vapar_5005 CDS
T00916
Name
(GenBank) transcriptional regulator, Crp/Fnr family
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
vap
Variovorax paradoxus S110
Pathway
vap02020
Two-component system
vap02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Vapar_5005
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Vapar_5005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vap03000
]
Vapar_5005
Transcription factors [BR:
vap03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
Vapar_5005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Crp_2
cNMP_binding
GntR
HTH_24
MarR_2
TrmB
Crp
AlkZ-like
HTH_3
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
ACS21608
UniProt:
C5CQ36
LinkDB
All DBs
Position
1:complement(5317579..5318364)
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AA seq
261 aa
AA seq
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MPHGNPNQRNVLGGSIKDRVRPPSSAELGGIPWLPTLTPAERRRAEAALVVGEAEVGDLV
CRVGRSPTYWFGVVEGLLKMSNDNADGGSVTYTGVPPGGWFGEGTVMKREPYRYNIQALR
RSVVAGLPIESFHWLLDHSIGFNRFVMNQLNERLGQFIAALEIDRLNNPDARVARNLVSL
FNPVLYPGVGEVLRITQQELAYLVGLSRQRVNEALNGLSAEGLIRVEYGGLRVLDLPGLR
ASAMSNKKNSSNSRSPETENP
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgcctcacggcaatcccaatcaacgcaacgtgctgggcggttccatcaaggaccgagtt
cgtccccctagcagtgccgaactcggcggcatcccgtggctgcccacgctcacgccggcc
gagcgccgccgcgccgaagccgcgctggtggtgggcgaggccgaggtcggcgacctggtc
tgccgcgtcggccgctcgcccacctactggttcggcgtggtcgagggcctgctcaagatg
agcaacgacaacgccgacggcggctccgtcacctacaccggcgtgccgcccggcggctgg
ttcggcgaaggcacggtgatgaagcgcgagccctaccgctacaacatccaggcgctgcgg
cgcagcgtggtggcggggctgccgatcgagagcttccactggctgctcgatcattcgatc
ggcttcaaccgcttcgtgatgaaccagctcaacgagcggctcggccagttcattgcggcg
ctggagatcgaccggctcaacaaccccgacgcgcgcgtggcgcgcaacctcgtgtcgctg
ttcaacccggtgctctacccgggcgtgggcgaagtgctgcgcatcacgcagcaggagctg
gcctacctggtcggcctgtcgcgccagcgcgtgaacgaggcgctcaacggcctgtcggca
gaggggttgatccgggtggagtacggtgggctgcgcgtgctcgacctgccgggcctgcgc
gcgagcgcgatgtcgaacaagaagaacagcagcaacagccgctcacccgaaacggaaaac
ccatga
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